- Transcript 'KH2012:KH.C9.38.v7.A...'
Transcript Model
Transcript Id
KH2012:KH.C9.38.v7.A.nonSL7-2
Possible name(s)
FUBP1; FUBP3; KHSRP
Gene model
Location
KhC9 [5,590,748 / 5,600,636]
Amino acid sequence
Length: 584
>KH.C9.38.v7.A.nonSL7-2
KLTIFLLESTLQTHRTWPKETSYSSDVCCKQDIMSDTIRLPDDLVGLIIGRGGENIMRMQ
RETGCRIQITQSIPGTKERPCTLSGTQEQIEVCRNMLNEIISRSQAGTLGSNFNLSQGGL
GGMGDGGMEKSIEIAVPPDKCGLIIGKGGETIKMLQQSLGVKMLLIQDSTDNIGQSKPLR
ITGPQLNVDVCVCILMDLVSSFPFIQPNMFGDDVNKTIIPVPKAAVGVVIGKGGDMINQI
QNVTGTRVQFKPEDPTLPERMCSVMGPKEGVDAAIRRIHEIIQNVQERDGHPGGMGGFGQ
WEGPNMGRGGRGMGMASEEHLVPANKTGLVIGKGGDTIKQINMQSGAHAEIQRNPPPGSD
LNYKTFIIKGTPEQIKMARQLIQEKVDAGPGGSSNGQMHGGHMGGQPPMSNFGPPPHQGG
YGGLPPAAGYGHPSHNPLQGPPQAPQAPQSYQQPWGNQFQQWNSPTVSAPQQNGADPISA
APASQPDYSKQWDEYLKQNAAAVAEQRQQLTLAAPAAAAAIQQQQVAAPAAAAPAASAAV
QPATTQAADYSAAWAEYYRQYYAMHGQAGYAAAAAAAGQAPAPT
Nucleotide sequence
Length: 2,200
>KH2012:KH.C9.38.v7.A.nonSL7-2
ACAAATTGACAATATTTCTGCTGGAGTCGACACTACAAACGCACAGAACCTGGCCCAAAG
AAACTAGCTACTCCTCAGACGTCTGCTGCAAACAAGATATAATGTCAGATACGATCAGAT
TGCCAGATGATCTTGTGGGATTAATTATTGGTAGGGGAGGGGAAAACATAATGCGAATGC
AACGTGAAACTGGATGTAGGATTCAAATCACGCAAAGTATTCCGGGCACCAAAGAAAGAC
CATGCACACTGTCGGGCACTCAAGAACAAATAGAAGTGTGCAGAAATATGTTGAATGAAA
TAATCTCCCGTTCACAAGCGGGCACACTGGGCAGCAACTTTAATCTTTCACAAGGTGGCT
TGGGGGGTATGGGGGACGGAGGAATGGAGAAATCTATCGAGATCGCTGTCCCACCCGACA
AGTGTGGTCTTATAATTGGAAAAGGTGGAGAAACAATTAAAATGTTGCAGCAAAGTTTGG
GGGTTAAGATGTTGCTGATTCAGGATTCTACTGATAACATCGGTCAGAGCAAACCACTGA
GGATAACTGGTCCACAACTTAATGTTGATGTATGTGTATGCATTTTAATGGATTTAGTTT
CATCATTTCCCTTTATACAGCCCAATATGTTTGGAGATGATGTGAACAAAACCATCATCC
CAGTTCCCAAAGCTGCCGTTGGAGTAGTGATTGGGAAAGGCGGGGACATGATCAACCAAA
TCCAAAACGTCACTGGAACCAGAGTTCAGTTCAAACCAGAGGATCCTACTTTACCTGAAC
GTATGTGCAGCGTGATGGGACCAAAGGAAGGAGTAGATGCTGCTATTAGAAGGATCCATG
AGATTATACAGAACGTACAAGAACGTGATGGTCATCCTGGTGGAATGGGAGGATTTGGCC
AGTGGGAAGGACCAAACATGGGTCGGGGTGGTAGAGGCATGGGAATGGCATCTGAGGAAC
ACTTGGTGCCTGCTAATAAAACTGGACTGGTAATTGGAAAAGGTGGAGACACCATTAAAC
AAATCAACATGCAGTCTGGTGCACATGCTGAGATACAGAGAAATCCTCCACCTGGTTCAG
ATCTCAATTACAAAACTTTCATCATCAAAGGCACTCCTGAACAAATTAAAATGGCGCGCC
AGTTGATCCAGGAGAAAGTTGACGCTGGTCCAGGTGGTTCGAGCAATGGACAGATGCACG
GTGGACACATGGGAGGCCAACCACCTATGAGTAACTTTGGTCCACCACCACACCAGGGAG
GGTATGGTGGTCTCCCACCAGCAGCAGGATATGGACATCCAAGCCATAACCCATTGCAGG
GGCCACCTCAGGCTCCCCAAGCACCACAGTCATACCAGCAACCATGGGGTAATCAATTTC
AGCAATGGAATTCACCAACTGTGTCCGCTCCACAGCAAAACGGTGCTGATCCAATTTCCG
CTGCACCTGCTTCACAACCAGATTATTCCAAACAATGGGATGAATACTTGAAACAGAATG
CTGCGGCAGTTGCAGAACAACGTCAACAACTTACTTTGGCCGCTCCAGCCGCTGCTGCTG
CCATTCAACAACAACAGGTAGCTGCTCCAGCTGCTGCTGCACCGGCTGCCTCTGCTGCTG
TTCAACCAGCTACCACTCAGGCGGCTGACTATTCTGCAGCATGGGCCGAGTATTACAGAC
AATACTACGCCATGCACGGACAAGCAGGTTATGCGGCTGCTGCTGCCGCTGCTGGACAAG
CCCCAGCCCCAACGTAAACATTTCCAGTATCACTGATCACCATTGTAAATATCCAAGATC
TGATGATATCGTCTACAACTGAAGTTACATCCCCATAACTTTGTGGTGCGCCCAGCATTG
GGCTTTGTACATATTGTGGTGAACTTTCATTCCTTCAACTCGGCAGGTATCCTGTCAACA
CTTCGTAAAACTAACTCGCTTAATTTCTAATTTAAAATGTTAATATTAAGTTACTTGCAC
CTGTGTTAACCACCTGTTGCCCCAACCCTTCTGCGTAATCACACATCGGCAGTTCACATC
CAGCTCAAACCGGTTCTCCCAATTAGAGAATTCAAAAAAATTTAAAAGGCTCTTGCTGGC
AGTCTTATATGATCCAGTGCTTCTACCTTTGCGTGCGTTTTACAAGTTAGCATCGCCGCC
GCGTTTTTATTTTGACCTTCCTTTTTTATTAACTGACAAA
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[25-107] 1.9E-23 - T[120-200] 9.0E-19 - T[207-317] 3.4E-25 - T[318-386] 2.0E-26 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[31-103] 2.92E-18 - T[125-205] 1.9E-14 - T[215-289] 4.24E-18 - T[312-387] 5.7E-16 |
| SMART |
KH_dom (IPR004087) - T[32-102] 5.1E-16 - T[128-200] 1.3E-12 - T[213-283] 1.6E-15 - T[314-387] 4.4E-12 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[37-99] 2.8E-17 - T[132-193] 8.6E-12 - T[217-280] 4.1E-15 - T[320-384] 2.1E-14 |
| Pfam |
FUBP_C (IPR015096) - T[543-560] 1.3E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 43.478 % | 271 | 6.45E-83 |
| FUBP2_HUMAN | 40.934 % | 256 | 1.66E-76 |
| FUBP3_HUMAN | 38.336 % | 311 | 6.95E-99 |