- Transcript 'KH2012:KH.C12.153.v2...' >
- Transcript 'KH2012:KH.C9.38.v8.A...'
Transcript Model
Transcript Id
KH2012:KH.C9.38.v8.A.SL2-2
Possible name(s)
FUBP1; FUBP3; KHSRP
Gene model
Location
KhC9 [5,591,753 / 5,600,636]
Amino acid sequence
Length: 570
>KH.C9.38.v8.A.SL2-2
RTWPKETSYSSDVCCKQDIMSDTIRLPDDLVGLIIGRGGENIMRMQRETGCRIQITQSIP
GTKERPCTLSGTQEQIEVCRNMLNEIISRSQAGTLGSNFNLSQGGLGGMGDGGMEKSIEI
AVPPDKCGLIIGKGGETIKMLQQSLGVKMLLIQDSTDNIGQSKPLRITGPQLNVDVCVCI
LMDLVSSFPFIQPNMFGDDVNKTIIPVPKAAVGVVIGKGGDMINQIQNVTGTRVQFKPED
PTLPERMCSVMGPKEGVDAAIRRIHEIIQNVQERDGHPGGMGGFGQWEGPNMGRGGRGMG
MASEEHLVPANKTGLVIGKGGDTIKQINMQSGAHAEIQRNPPPGSDLNYKTFIIKGTPEQ
IKMARQLIQEKVDAGPGGSSNGQMHGGHMGGQPPMSNFGPPPHQGGYGGLPPAAGYGHPS
HNPLQGPPQAPQAPQSYQQPWGNQFQQWNSPTVSAPQQNGADPISAAPASQPDYSKQWDE
YLKQNAAAVAEQRQQLTLAAPAAAAAIQQQQVAAPAAAAPAASAAVQPATTQAADYSAAW
AEYYRQYYAMHGQAGYAAAAAAAGQAPAPT
Nucleotide sequence
Length: 2,307
>KH2012:KH.C9.38.v8.A.SL2-2
GGGATTCTATTAGCACCAGATGCTGTAGCAGGTCTGACATAATGTTTATTGTTTAATCCA
AGCAGCTTACAGAAGCCAAGGACAATCACTCCACTAATTCCCCTGGGCCTATGGGAGACG
CCCCTAACAAGAGACCCTTAGAAGATGGTGAAGAACCTGGCCCAAAGAAACTAGCTACTC
CTCAGACGTCTGCTGCAAACAAGATATAATGTCAGATACGATCAGATTGCCAGATGATCT
TGTGGGATTAATTATTGGTAGGGGAGGGGAAAACATAATGCGAATGCAACGTGAAACTGG
ATGTAGGATTCAAATCACGCAAAGTATTCCGGGCACCAAAGAAAGACCATGCACACTGTC
GGGCACTCAAGAACAAATAGAAGTGTGCAGAAATATGTTGAATGAAATAATCTCCCGTTC
ACAAGCGGGCACACTGGGCAGCAACTTTAATCTTTCACAAGGTGGCTTGGGGGGTATGGG
GGACGGAGGAATGGAGAAATCTATCGAGATCGCTGTCCCACCCGACAAGTGTGGTCTTAT
AATTGGAAAAGGTGGAGAAACAATTAAAATGTTGCAGCAAAGTTTGGGGGTTAAGATGTT
GCTGATTCAGGATTCTACTGATAACATCGGTCAGAGCAAACCACTGAGGATAACTGGTCC
ACAACTTAATGTTGATGTATGTGTATGCATTTTAATGGATTTAGTTTCATCATTTCCCTT
TATACAGCCCAATATGTTTGGAGATGATGTGAACAAAACCATCATCCCAGTTCCCAAAGC
TGCCGTTGGAGTAGTGATTGGGAAAGGCGGGGACATGATCAACCAAATCCAAAACGTCAC
TGGAACCAGAGTTCAGTTCAAACCAGAGGATCCTACTTTACCTGAACGTATGTGCAGCGT
GATGGGACCAAAGGAAGGAGTAGATGCTGCTATTAGAAGGATCCATGAGATTATACAGAA
CGTACAAGAACGTGATGGTCATCCTGGTGGAATGGGAGGATTTGGCCAGTGGGAAGGACC
AAACATGGGTCGGGGTGGTAGAGGCATGGGAATGGCATCTGAGGAACACTTGGTGCCTGC
TAATAAAACTGGACTGGTAATTGGAAAAGGTGGAGACACCATTAAACAAATCAACATGCA
GTCTGGTGCACATGCTGAGATACAGAGAAATCCTCCACCTGGTTCAGATCTCAATTACAA
AACTTTCATCATCAAAGGCACTCCTGAACAAATTAAAATGGCGCGCCAGTTGATCCAGGA
GAAAGTTGACGCTGGTCCAGGTGGTTCGAGCAATGGACAGATGCACGGTGGACACATGGG
AGGCCAACCACCTATGAGTAACTTTGGTCCACCACCACACCAGGGAGGGTATGGTGGTCT
CCCACCAGCAGCAGGATATGGACATCCAAGCCATAACCCATTGCAGGGGCCACCTCAGGC
TCCCCAAGCACCACAGTCATACCAGCAACCATGGGGTAATCAATTTCAGCAATGGAATTC
ACCAACTGTGTCCGCTCCACAGCAAAACGGTGCTGATCCAATTTCCGCTGCACCTGCTTC
ACAACCAGATTATTCCAAACAATGGGATGAATACTTGAAACAGAATGCTGCGGCAGTTGC
AGAACAACGTCAACAACTTACTTTGGCCGCTCCAGCCGCTGCTGCTGCCATTCAACAACA
ACAGGTAGCTGCTCCAGCTGCTGCTGCACCGGCTGCCTCTGCTGCTGTTCAACCAGCTAC
CACTCAGGCGGCTGACTATTCTGCAGCATGGGCCGAGTATTACAGACAATACTACGCCAT
GCACGGACAAGCAGGTTATGCGGCTGCTGCTGCCGCTGCTGGACAAGCCCCAGCCCCAAC
GTAAACATTTCCAGTATCACTGATCACCATTGTAAATATCCAAGATCTGATGATATCGTC
TACAACTGAAGTTACATCCCCATAACTTTGTGGTGCGCCCAGCATTGGGCTTTGTACATA
TTGTGGTGAACTTTCATTCCTTCAACTCGGCAGGTATCCTGTCAACACTTCGTAAAACTA
ACTCGCTTAATTTCTAATTTAAAATGTTAATATTAAGTTACTTGCACCTGTGTTAACCAC
CTGTTGCCCCAACCCTTCTGCGTAATCACACATCGGCAGTTCACATCCAGCTCAAACCGG
TTCTCCCAATTAGAGAATTCAAAAAAATTTAAAAGGCTCTTGCTGGCAGTCTTATATGAT
CCAGTGCTTCTACCTTTGCGTGCGTTTTACAAGTTAGCATCGCCGCCGCGTTTTTATTTT
GACCTTCCTTTTTTATTAACTGACAAA
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[11-93] 1.8E-23 - T[106-186] 8.7E-19 - T[193-303] 3.3E-25 - T[304-372] 1.9E-26 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[17-89] 2.78E-18 - T[111-191] 1.75E-14 - T[201-275] 4.09E-18 - T[298-373] 5.55E-16 |
| SMART |
KH_dom (IPR004087) - T[18-88] 5.1E-16 - T[114-186] 1.3E-12 - T[199-269] 1.6E-15 - T[300-373] 4.4E-12 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[23-85] 2.7E-17 - T[118-179] 8.3E-12 - T[203-266] 4.0E-15 - T[306-370] 2.0E-14 |
| Pfam |
FUBP_C (IPR015096) - T[529-546] 1.3E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 43.478 % | 272 | 3.93E-83 |
| FUBP2_HUMAN | 40.934 % | 256 | 1.79E-76 |
| FUBP3_HUMAN | 38.309 % | 312 | 3.04E-99 |