- Transcript 'KH2012:KH.C9.38.v9.A...'
Transcript Model
Transcript Id
KH2012:KH.C9.38.v9.A.SL1-2
Possible name(s)
FUBP1; FUBP3; KHSRP
Gene model
Location
KhC9 [5,592,603 / 5,600,636]
Amino acid sequence
Length: 616
>KH.C9.38.v9.A.SL1-2
GLNLNFVIFRRTWPKETSYSSDVCCKQDIMSDTIRLPDDLVGLIIGRGGENIMRMQRETG
CRIQITQSIPGTKERPCTLSGTQEQIEVCRNMLNEIISRSQAGTLGSNFNLSQGGLGGMG
DGGMEKSIEIAVPPDKCGLIIGKGGETIKMLQQSLGVKMLLIQDSTDNIGQSKPLRITGP
QLNVDVCVCILMDLVSSFPFIQPNMFGDDVNKTIIPVPKAAVGVVIGKGGDMINQIQNVT
GTRVQFKPEDPTLPERMCSVMGPKEGVDAAIRRIHEIIQNVQERDGHPGGMGGFGQWEGP
NMGRGGRGMGMASEEHLVPANKTGLVIGKGGDTIKQINMQSGAHAEIQRNPPPGSDLNYK
TFIIKGTPEQIKMARQLIQEKVDAGPGGSSNGQMHGGHMGGQPPMSNFGPPPHQQGGYGG
LPPAAGYGHPSHNPLQGPPQAPQAPQSYQQPWGNQFQQWNSPTVSAPQQNGADPTKPVAD
SSNAAAWQTYLQMYGAQAQAYQQPAAAAAVSAAPASQPDYSKQWDEYLKQNAAAVAEQRQ
QLTLAAPAAAAAIQQQQVAAPAAAAPAASAAVQPATTQAADYSAAWAEYYRQYYAMHGQA
GYAAAAAAAGQAPAPT
Nucleotide sequence
Length: 2,310
>KH2012:KH.C9.38.v9.A.SL1-2
AGGTCTTGTGCATTAGGGTTTGAATTTAAACTTTGTCATTTTTAGAAGAACCTGGCCCAA
AGAAACTAGCTACTCCTCAGACGTCTGCTGCAAACAAGATATAATGTCAGATACGATCAG
ATTGCCAGATGATCTTGTGGGATTAATTATTGGTAGGGGAGGGGAAAACATAATGCGAAT
GCAACGTGAAACTGGATGTAGGATTCAAATCACGCAAAGTATTCCGGGCACCAAAGAAAG
ACCATGCACACTGTCGGGCACTCAAGAACAAATAGAAGTGTGCAGAAATATGTTGAATGA
AATAATCTCCCGTTCACAAGCGGGCACACTGGGCAGCAACTTTAATCTTTCACAAGGTGG
CTTGGGGGGTATGGGGGACGGAGGAATGGAGAAATCTATCGAGATCGCTGTCCCACCCGA
CAAGTGTGGTCTTATAATTGGAAAAGGTGGAGAAACAATTAAAATGTTGCAGCAAAGTTT
GGGGGTTAAGATGTTGCTGATTCAGGATTCTACTGATAACATCGGTCAGAGCAAACCACT
GAGGATAACTGGTCCACAACTTAATGTTGATGTATGTGTATGCATTTTAATGGATTTAGT
TTCATCATTTCCCTTTATACAGCCCAATATGTTTGGAGATGATGTGAACAAAACCATCAT
CCCAGTTCCCAAAGCTGCCGTTGGAGTAGTGATTGGGAAAGGCGGGGACATGATCAACCA
AATCCAAAACGTCACTGGAACCAGAGTTCAGTTCAAACCAGAGGATCCTACTTTACCTGA
ACGTATGTGCAGCGTGATGGGACCAAAGGAAGGAGTAGATGCTGCTATTAGAAGGATCCA
TGAGATTATACAGAACGTACAAGAACGTGATGGTCATCCTGGTGGAATGGGAGGATTTGG
CCAGTGGGAAGGACCAAACATGGGTCGGGGTGGTAGAGGCATGGGAATGGCATCTGAGGA
ACACTTGGTGCCTGCTAATAAAACTGGACTGGTAATTGGAAAAGGTGGAGACACCATTAA
ACAAATCAACATGCAGTCTGGTGCACATGCTGAGATACAGAGAAATCCTCCACCTGGTTC
AGATCTCAATTACAAAACTTTCATCATCAAAGGCACTCCTGAACAAATTAAAATGGCGCG
CCAGTTGATCCAGGAGAAAGTTGACGCTGGTCCAGGTGGTTCGAGCAATGGACAGATGCA
CGGTGGACACATGGGAGGCCAACCACCTATGAGTAACTTTGGTCCACCACCACACCAGCA
GGGAGGGTATGGTGGTCTCCCACCAGCAGCAGGATATGGACATCCAAGCCATAACCCATT
GCAGGGGCCACCTCAGGCTCCCCAAGCACCACAGTCATACCAGCAACCATGGGGTAATCA
ATTTCAGCAATGGAATTCACCAACTGTGTCCGCTCCACAGCAAAACGGTGCTGATCCAAC
GAAACCTGTGGCTGATTCTAGCAATGCTGCAGCTTGGCAGACGTACCTTCAAATGTATGG
AGCACAAGCACAAGCATACCAACAACCTGCTGCTGCTGCTGCAGTTTCCGCTGCACCTGC
TTCACAACCAGATTATTCCAAACAATGGGATGAATACTTGAAACAGAATGCTGCGGCAGT
TGCAGAACAACGTCAACAACTTACTTTGGCCGCTCCAGCCGCTGCTGCTGCCATTCAACA
ACAACAGGTAGCTGCTCCAGCTGCTGCTGCACCGGCTGCCTCTGCTGCTGTTCAACCAGC
TACCACTCAGGCGGCTGACTATTCTGCAGCATGGGCCGAGTATTACAGACAATACTACGC
CATGCACGGACAAGCAGGTTATGCGGCTGCTGCTGCCGCTGCTGGACAAGCCCCAGCCCC
AACGTAAACATTTCCAGTATCACTGATCACCATTGTAAATATCCAAGATCTGATGATATC
GTCTACAACTGAAGTTACATCCCCATAACTTTGTGGTGCGCCCAGCATTGGGCTTTGTAC
ATATTGTGGTGAACTTTCATTCCTTCAACTCGGCAGGTATCCTGTCAACACTTCGTAAAA
CTAACTCGCTTAATTTCTAATTTAAAATGTTAATATTAAGTTACTTGCACCTGTGTTAAC
CACCTGTTGCCCCAACCCTTCTGCGTAATCACACATCGGCAGTTCACATCCAGCTCAAAC
CGGTTCTCCCAATTAGAGAATTCAAAAAAATTTAAAAGGCTCTTGCTGGCAGTCTTATAT
GATCCAGTGCTTCTACCTTTGCGTGCGTTTTACAAGTTAGCATCGCCGCCGCGTTTTTAT
TTTGACCTTCCTTTTTTATTAACTGACAAA
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[21-103] 2.1E-23 - T[116-196] 9.8E-19 - T[204-313] 3.8E-25 - T[314-382] 2.2E-26 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[27-99] 3.07E-18 - T[121-201] 2.05E-14 - T[211-285] 4.53E-18 - T[308-383] 6.28E-16 |
| SMART |
KH_dom (IPR004087) - T[28-98] 5.1E-16 - T[124-196] 1.3E-12 - T[209-279] 1.6E-15 - T[310-383] 4.4E-12 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[33-95] 3.0E-17 - T[128-189] 9.2E-12 - T[213-276] 4.4E-15 - T[316-380] 2.2E-14 |
| Pfam |
FUBP_C (IPR015096) - T[575-592] 1.4E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 43.478 % | 272 | 7.16E-83 |
| FUBP2_HUMAN | 36.224 % | 275 | 3.31E-83 |
| FUBP3_HUMAN | 38.58 % | 301 | 1.64E-94 |