- Transcript 'KH2012:KH.L137.2.v1....' >
- Transcript 'KH2012:KH.L3.1.v7.A....' >
- Transcript 'KH2012:KH.C9.606.v1....' >
- Transcript 'KH2012:KH.C3.99.v1.A...' >
- Transcript 'KH2012:KH.C9.38.v9.A...'
Transcript Model
Transcript Id
KH2012:KH.C9.38.v9.A.SL3-2
Possible name(s)
FUBP1; FUBP3; KHSRP
Gene model
Location
KhC9 [5,592,648 / 5,600,636]
Amino acid sequence
Length: 606
>KH.C9.38.v9.A.SL3-2
RTWPKETSYSSDVCCKQDIMSDTIRLPDDLVGLIIGRGGENIMRMQRETGCRIQITQSIP
GTKERPCTLSGTQEQIEVCRNMLNEIISRSQAGTLGSNFNLSQGGLGGMGDGGMEKSIEI
AVPPDKCGLIIGKGGETIKMLQQSLGVKMLLIQDSTDNIGQSKPLRITGPQLNVDVCVCI
LMDLVSSFPFIQPNMFGDDVNKTIIPVPKAAVGVVIGKGGDMINQIQNVTGTRVQFKPED
PTLPERMCSVMGPKEGVDAAIRRIHEIIQNVQERDGHPGGMGGFGQWEGPNMGRGGRGMG
MASEEHLVPANKTGLVIGKGGDTIKQINMQSGAHAEIQRNPPPGSDLNYKTFIIKGTPEQ
IKMARQLIQEKVDAGPGGSSNGQMHGGHMGGQPPMSNFGPPPHQQGGYGGLPPAAGYGHP
SHNPLQGPPQAPQAPQSYQQPWGNQFQQWNSPTVSAPQQNGADPTKPVADSSNAAAWQTY
LQMYGAQAQAYQQPAAAAAVSAAPASQPDYSKQWDEYLKQNAAAVAEQRQQLTLAAPAAA
AAIQQQQVAAPAAAAPAASAAVQPATTQAADYSAAWAEYYRQYYAMHGQAGYAAAAAAAG
QAPAPT
Nucleotide sequence
Length: 2,265
>KH2012:KH.C9.38.v9.A.SL3-2
AAGAACCTGGCCCAAAGAAACTAGCTACTCCTCAGACGTCTGCTGCAAACAAGATATAAT
GTCAGATACGATCAGATTGCCAGATGATCTTGTGGGATTAATTATTGGTAGGGGAGGGGA
AAACATAATGCGAATGCAACGTGAAACTGGATGTAGGATTCAAATCACGCAAAGTATTCC
GGGCACCAAAGAAAGACCATGCACACTGTCGGGCACTCAAGAACAAATAGAAGTGTGCAG
AAATATGTTGAATGAAATAATCTCCCGTTCACAAGCGGGCACACTGGGCAGCAACTTTAA
TCTTTCACAAGGTGGCTTGGGGGGTATGGGGGACGGAGGAATGGAGAAATCTATCGAGAT
CGCTGTCCCACCCGACAAGTGTGGTCTTATAATTGGAAAAGGTGGAGAAACAATTAAAAT
GTTGCAGCAAAGTTTGGGGGTTAAGATGTTGCTGATTCAGGATTCTACTGATAACATCGG
TCAGAGCAAACCACTGAGGATAACTGGTCCACAACTTAATGTTGATGTATGTGTATGCAT
TTTAATGGATTTAGTTTCATCATTTCCCTTTATACAGCCCAATATGTTTGGAGATGATGT
GAACAAAACCATCATCCCAGTTCCCAAAGCTGCCGTTGGAGTAGTGATTGGGAAAGGCGG
GGACATGATCAACCAAATCCAAAACGTCACTGGAACCAGAGTTCAGTTCAAACCAGAGGA
TCCTACTTTACCTGAACGTATGTGCAGCGTGATGGGACCAAAGGAAGGAGTAGATGCTGC
TATTAGAAGGATCCATGAGATTATACAGAACGTACAAGAACGTGATGGTCATCCTGGTGG
AATGGGAGGATTTGGCCAGTGGGAAGGACCAAACATGGGTCGGGGTGGTAGAGGCATGGG
AATGGCATCTGAGGAACACTTGGTGCCTGCTAATAAAACTGGACTGGTAATTGGAAAAGG
TGGAGACACCATTAAACAAATCAACATGCAGTCTGGTGCACATGCTGAGATACAGAGAAA
TCCTCCACCTGGTTCAGATCTCAATTACAAAACTTTCATCATCAAAGGCACTCCTGAACA
AATTAAAATGGCGCGCCAGTTGATCCAGGAGAAAGTTGACGCTGGTCCAGGTGGTTCGAG
CAATGGACAGATGCACGGTGGACACATGGGAGGCCAACCACCTATGAGTAACTTTGGTCC
ACCACCACACCAGCAGGGAGGGTATGGTGGTCTCCCACCAGCAGCAGGATATGGACATCC
AAGCCATAACCCATTGCAGGGGCCACCTCAGGCTCCCCAAGCACCACAGTCATACCAGCA
ACCATGGGGTAATCAATTTCAGCAATGGAATTCACCAACTGTGTCCGCTCCACAGCAAAA
CGGTGCTGATCCAACGAAACCTGTGGCTGATTCTAGCAATGCTGCAGCTTGGCAGACGTA
CCTTCAAATGTATGGAGCACAAGCACAAGCATACCAACAACCTGCTGCTGCTGCTGCAGT
TTCCGCTGCACCTGCTTCACAACCAGATTATTCCAAACAATGGGATGAATACTTGAAACA
GAATGCTGCGGCAGTTGCAGAACAACGTCAACAACTTACTTTGGCCGCTCCAGCCGCTGC
TGCTGCCATTCAACAACAACAGGTAGCTGCTCCAGCTGCTGCTGCACCGGCTGCCTCTGC
TGCTGTTCAACCAGCTACCACTCAGGCGGCTGACTATTCTGCAGCATGGGCCGAGTATTA
CAGACAATACTACGCCATGCACGGACAAGCAGGTTATGCGGCTGCTGCTGCCGCTGCTGG
ACAAGCCCCAGCCCCAACGTAAACATTTCCAGTATCACTGATCACCATTGTAAATATCCA
AGATCTGATGATATCGTCTACAACTGAAGTTACATCCCCATAACTTTGTGGTGCGCCCAG
CATTGGGCTTTGTACATATTGTGGTGAACTTTCATTCCTTCAACTCGGCAGGTATCCTGT
CAACACTTCGTAAAACTAACTCGCTTAATTTCTAATTTAAAATGTTAATATTAAGTTACT
TGCACCTGTGTTAACCACCTGTTGCCCCAACCCTTCTGCGTAATCACACATCGGCAGTTC
ACATCCAGCTCAAACCGGTTCTCCCAATTAGAGAATTCAAAAAAATTTAAAAGGCTCTTG
CTGGCAGTCTTATATGATCCAGTGCTTCTACCTTTGCGTGCGTTTTACAAGTTAGCATCG
CCGCCGCGTTTTTATTTTGACCTTCCTTTTTTATTAACTGACAAA
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[11-93] 2.0E-23 - T[106-186] 9.5E-19 - T[194-303] 3.7E-25 - T[304-372] 2.1E-26 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[17-89] 3.07E-18 - T[111-191] 2.05E-14 - T[201-275] 4.53E-18 - T[298-373] 6.14E-16 |
| SMART |
KH_dom (IPR004087) - T[18-88] 5.1E-16 - T[114-186] 1.3E-12 - T[199-269] 1.6E-15 - T[300-373] 4.4E-12 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[23-85] 2.9E-17 - T[118-179] 9.0E-12 - T[203-266] 4.4E-15 - T[306-370] 2.2E-14 |
| Pfam |
FUBP_C (IPR015096) - T[565-582] 1.4E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 43.478 % | 273 | 3.7E-83 |
| FUBP2_HUMAN | 36.224 % | 275 | 2.27E-83 |
| FUBP3_HUMAN | 38.964 % | 301 | 1.28E-94 |