- Clone 'cieg034n24' >
- Clone 'cien85042' >
- Transcript 'KH2012:KH.C9.406.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.406.v1.A.nonSL2-1
Possible name(s)
SLC6A1; SLC6A5; SLC6A9
Gene model
Location
KhC9 [2,033,434 / 2,044,458]
Amino acid sequence
Length: 678
>KH.C9.406.v1.A.nonSL2-1
TSAQPPNLPSTKMSTEMKKSELSDDPVVTSLIDEKKPAAKGEVERETWDKKLDFMLSCIG
YAVGLGNIWRFPYLCYKNGGGAFLIPYLIFLLICGIPLFFLELSFGQFGALGPVAIWKIA
PIFKGVGFCMMIISFMVCVYYNVIIAYSLHFIFNSFTSTLPWSTCGNDWNTEFCRTNYSS
NTTMPPVWTGIDCGKGKGWFEDIMNTSVNYTQLNNVSYMGHKSWTESIDVNGSCIQFNTS
SQEYFSRKVLRLTDSIATLGGIQWELLGFLALAWVIVFMCLFKGVKWSGKVVYFTATFPY
VVLVILLIRGVMEEGAMDGIHYYLTPNITRLQDVKVWSDAAVQIFYSLGAAWGVLLSYSS
LNKFNNNVYRDAVSICFVNCCTSFLAGFVVFSVLGALAFQTGRDIEDVVDQGAGLAFVAY
PAAVANLPIAPLWAFLFFFMLLNLGLDSQFGMIEAVVSGLLDEVSWFRKNRVKFLAGLCF
VQFLLAIPMVTESGMYWVTLIDWYASGFPLMCAAVCEIICIAWVYGVDRFLYDIRCMIGH
KPFLWPWWKATWSCITPICIFLIMTAHLAFYSPVEYNKIVYPSWAEVVGWLSASASILMI
PGWAIYQLNYHPRAKGSLPERLAAISRCDADWGPRDPMIPYKYRKQAEPLKSRVHCCSST
ESCASDLSDPPVYKVNSV
Nucleotide sequence
Length: 2,724
>KH2012:KH.C9.406.v1.A.nonSL2-1
AATAGAGTATCGTCTGGAGAGGAACAACTTGTTTACTACAGTTTGTTTGAACAAGCGCCC
AACCCCCGAACCTTCCGTCAACGAAAATGTCAACAGAAATGAAGAAATCGGAGTTATCAG
ACGACCCTGTCGTAACAAGTCTGATAGATGAGAAGAAACCTGCTGCTAAGGGCGAAGTCG
AACGAGAGACCTGGGATAAGAAACTTGATTTTATGTTATCTTGTATCGGTTATGCGGTAG
GACTGGGAAACATATGGCGATTTCCTTATCTCTGCTACAAGAATGGGGGAGGAGCATTTC
TCATTCCATACCTCATCTTTTTATTAATTTGTGGAATCCCTCTGTTTTTCCTTGAACTGT
CTTTCGGGCAGTTTGGAGCTTTGGGTCCAGTTGCCATATGGAAGATAGCTCCTATATTTA
AAGGAGTCGGATTCTGCATGATGATCATATCGTTCATGGTATGCGTTTATTACAACGTTA
TTATAGCCTACAGTTTACATTTCATTTTCAACTCATTCACGTCAACTTTACCATGGTCGA
CGTGTGGGAACGATTGGAATACAGAGTTCTGCCGAACCAACTACAGTTCAAATACCACTA
TGCCTCCCGTATGGACTGGTATTGATTGCGGAAAAGGCAAAGGATGGTTCGAAGATATAA
TGAACACGTCTGTCAATTATACTCAGTTAAACAACGTTTCCTATATGGGCCATAAAAGCT
GGACAGAGAGCATAGATGTAAACGGTTCTTGCATCCAATTTAACACTTCGTCCCAGGAAT
ATTTCTCACGAAAAGTTCTCCGTTTGACCGACAGCATTGCTACATTGGGTGGAATACAGT
GGGAGTTGTTAGGATTCCTTGCCCTTGCATGGGTCATCGTGTTTATGTGTTTGTTTAAAG
GAGTCAAATGGTCAGGCAAGGTTGTTTATTTCACTGCCACTTTTCCGTACGTTGTTTTGG
TGATTCTATTGATCCGTGGTGTTATGGAGGAAGGTGCTATGGATGGAATACATTATTATC
TAACACCTAATATTACGCGATTGCAGGACGTGAAGGTATGGTCCGATGCGGCTGTTCAGA
TCTTTTATTCGCTGGGTGCAGCGTGGGGCGTCCTGCTTTCTTATTCCTCGCTTAATAAGT
TTAATAACAACGTTTACAGAGACGCGGTGTCCATATGTTTTGTAAATTGTTGTACGAGTT
TCCTTGCCGGGTTTGTTGTGTTCTCAGTCCTCGGGGCGCTGGCATTTCAGACTGGTAGAG
ATATTGAAGACGTTGTTGATCAAGGAGCCGGACTTGCTTTTGTTGCCTACCCTGCTGCCG
TTGCCAATCTACCAATTGCCCCATTATGGGCGTTCCTATTTTTCTTCATGCTTTTAAATC
TTGGTTTGGACAGCCAGTTTGGAATGATCGAAGCTGTGGTGTCTGGACTTCTTGACGAAG
TATCTTGGTTTCGAAAAAATCGTGTCAAATTCCTTGCCGGCCTTTGCTTTGTACAATTCC
TACTAGCAATACCGATGGTTACAGAGAGTGGGATGTATTGGGTTACATTGATCGATTGGT
ACGCGTCCGGTTTCCCGTTAATGTGCGCTGCTGTGTGCGAGATCATATGTATTGCCTGGG
TTTACGGCGTTGATCGTTTCTTGTACGACATCCGTTGCATGATTGGACACAAGCCGTTCT
TATGGCCCTGGTGGAAAGCTACATGGAGCTGTATTACTCCCATCTGCATATTTTTGATCA
TGACTGCTCATCTTGCTTTCTATTCACCCGTCGAATATAACAAGATTGTTTATCCCAGCT
GGGCTGAGGTTGTGGGCTGGCTTTCTGCTTCGGCTTCAATTCTTATGATTCCTGGATGGG
CGATTTACCAACTAAATTACCACCCAAGAGCTAAGGGTTCTTTGCCAGAGAGGCTGGCTG
CTATTTCTCGCTGTGACGCGGATTGGGGGCCCCGAGATCCCATGATCCCATACAAATACA
GGAAACAAGCGGAGCCTCTTAAAAGCCGAGTGCATTGTTGTAGTTCAACAGAAAGTTGCG
CTTCGGATTTATCAGACCCTCCTGTTTACAAAGTAAATTCAGTTTAAATTTCTCCAAGAC
CTGTCTCGTTACAAAAACTTTTACAAACTGTACATAATTATACAACGAACTCTTTATCTT
CTTCTGTGTTGCGGTTTGTTGCCATGCAATGTCACCTTTTATCGATGTTAAAACATCAGA
TTTTACCCAATTTACATCAAAATTTCCACTGATGAAAAATATTATATATTTTCAAAATCA
ATTATATTAATTCGTTGACTGCGTAAGCCATTCTTTGTTTCTCGTTTCTTTCACAACTTA
TTCGTTTAATTATCGCGAAAGGATAATATTCCTTTGTACCCGGTCCAATGAATGTGATTT
GTGTATAAGCTTGTAGTAAATATACTGTTGTATGCACTGTCAGAACTAAACTTGAGACTA
TTGTTTATTGTATGCTCTGTCAGGAAACTCGAGAAAACAGTTAATCATTCATCTAACAAC
GTCTACTGTTTATTATTAATCTGTCACGCGAGCCATATATGCTTCCGTTCGGTCGCTACC
ATATCACAAAGGTGTCTACCCTCGTTGTTTTGTATACAAGGCAAGAGATAAATTTCTAAG
AAAAAAAACTTTTGTTATTGTTGATGAATGTTTAAATTTGGCTTAAATTTATTATTAATA
AAAATTTTACTTCCTTGGTTAAAA
| PANTHER |
Na/ntran_symport (IPR000175) - T[39-608] 2.4E-232 |
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[44-613] 99.935 |
| Pfam |
Na/ntran_symport (IPR000175) - T[45-608] 5.1E-200 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[45-174] 7.85E-175 - T[239-608] 7.85E-175 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[53-74] 6.1E-75 - T[82-101] 6.1E-75 - T[125-151] 6.1E-75 - T[291-308] 6.1E-75 - T[373-393] 6.1E-75 - T[427-446] 6.1E-75 - T[507-527] 6.1E-75 - T[549-569] 6.1E-75 |
| ProSitePatterns |
Na/ntran_symport (IPR000175) - T[69-83] . - T[151-171] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SC6A5_HUMAN | 43.222 % | 510 | 8.83E-172 |
| SC6A9_HUMAN | 44.463 % | 502 | 1.02E-169 |
| SC6A1_HUMAN | 40.902 % | 511 | 1.07E-174 |