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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S6...' > 
  2. Transcript 'KH2012:KH.C3.264.v2....' > 
  3. Transcript 'KH2012:KH.C9.468.v1....'

Transcript Model

Transcript Id

KH2012:KH.C9.468.v1.A.nonSL11-1

Possible name(s)

PSMD5

Gene model

KH2012:KH.C9.468

Location

KhC9 [5,859,097 / 5,864,899]

Sequences

Amino acid sequence

Length: 525

>KH.C9.468.v1.A.nonSL11-1
SDSRRILYSKLIYCIKMDEGISSLIRNLSISDDRLQTLTEIKTFVVSSHSSTLKNVVQAS
DLETLFQCLENNDRDEVEAICFILSSLLPIVDPVDVAVKLASAIQNGLTHPNPDVQHLTL
KELQRVVAASDGATALSDSPDITRFAIFLVGDADESLAAAAVKFLSEFGRTSPNAARTML
KPDFQPHYRDLKTVMQKNDVVKFRVYEIVCNIQAESQEMLDLCVESGIVSDLVKELDGSD
VLGKVTCCTMLSGMASSNHSLDYLVQAGVVSKMTEMLKDSITDPFSDLYVPGVIRFFGNL
SLYNGPKFVLEIFPNFCKVIFTMVGSNDPPKQQVAMETLGIIGETLEGKKVLSEQGDDCT
TAVQDVCQILKHGKQDMRLIAVDCMSRLLDHKKVNENETDVAYKITLSWFRLLSSNPIDT
IINLCKQPFTDIRCSGFALLNTLADCQWGVEAMVEFATLVEFLLDRSTETEKSSKDAKFA
VIKTLTKSPNVASIFGNRNYLRFRQFLNEGPYYVGTQLSVAIDEA

Nucleotide sequence

Length: 1,780

>KH2012:KH.C9.468.v1.A.nonSL11-1
ATTTTCTTAGAGCGACTCAAGACGTATTTTGTACTCAAAGTTAATTTATTGCATTAAGAT
GGACGAAGGGATATCTAGTCTTATCCGTAACCTGTCAATTAGCGATGATCGACTTCAAAC
TTTGACCGAAATTAAAACGTTTGTTGTGAGTTCCCATTCGTCAACTTTAAAGAATGTAGT
GCAGGCGTCGGATTTGGAAACTCTGTTTCAATGCCTTGAAAACAACGACAGAGATGAAGT
TGAAGCAATATGTTTCATTCTCTCGTCACTTCTTCCCATCGTTGACCCAGTAGATGTAGC
TGTTAAACTTGCCTCGGCAATTCAGAATGGACTCACTCATCCAAATCCTGATGTGCAACA
CTTAACACTCAAAGAGCTACAAAGAGTTGTTGCTGCATCAGATGGCGCCACAGCATTATC
AGACTCCCCTGACATAACGAGGTTCGCTATTTTCTTGGTTGGTGACGCAGATGAATCGTT
AGCTGCTGCTGCTGTCAAATTTTTGTCGGAATTTGGGCGTACTTCACCCAACGCTGCTCG
TACAATGCTTAAACCAGATTTCCAACCTCATTATAGAGACCTTAAGACTGTGATGCAGAA
AAACGATGTTGTAAAGTTCAGAGTGTATGAGATTGTTTGCAACATTCAAGCAGAATCTCA
GGAAATGTTGGACCTTTGTGTAGAATCAGGAATTGTTAGCGATCTTGTGAAAGAACTTGA
CGGTAGTGATGTGCTTGGGAAAGTTACTTGTTGTACAATGTTATCTGGCATGGCATCTTC
AAACCATAGTTTGGATTATTTGGTACAAGCTGGCGTCGTCTCTAAAATGACTGAAATGTT
GAAGGATTCAATCACTGATCCATTCTCAGACCTTTATGTTCCAGGTGTTATTCGATTTTT
TGGTAACCTATCCCTCTACAATGGGCCTAAATTTGTGCTTGAAATCTTTCCCAATTTCTG
CAAAGTAATCTTCACTATGGTGGGAAGCAACGATCCACCAAAGCAACAGGTTGCCATGGA
AACATTGGGGATAATAGGAGAGACGTTGGAAGGAAAGAAAGTTTTGTCTGAACAAGGAGA
TGATTGTACCACCGCTGTACAAGATGTTTGCCAGATCTTAAAACACGGAAAGCAAGACAT
GCGACTGATAGCTGTTGACTGTATGAGTCGTCTGCTGGATCATAAAAAGGTCAATGAGAA
TGAGACAGATGTTGCATACAAGATCACATTGTCTTGGTTTCGACTTTTATCAAGCAATCC
AATTGACACGATCATCAACTTATGTAAACAACCATTTACGGATATTCGATGCTCTGGATT
TGCTTTGCTCAACACATTGGCCGACTGTCAGTGGGGTGTTGAAGCGATGGTGGAATTCGC
TACGCTCGTCGAATTCCTGCTCGACAGGAGCACTGAGACCGAAAAAAGCAGCAAAGACGC
GAAGTTCGCAGTCATAAAAACTCTCACTAAATCTCCCAACGTTGCAAGCATATTCGGCAA
CCGGAACTATCTTAGATTCAGACAATTCCTCAATGAAGGTCCGTATTATGTCGGGACTCA
ATTGTCAGTAGCCATTGACGAGGCTTGAGTTTTCAATAAATAAATGAAATTTATTTTCAT
TCTTCGGTTCTTTATATAAGCTGCTATTTACGGCTATACTGCTGCATGGTTCGTCTGCTG
AGTTGTTGTAACAAAGTACATGTTTTTTTTCAATATTGCTTGTTTTTTATGGCCCTTTTA
TTTGGCTCCTTAATAAAACTTTTGTTTGAGAGTGGTTAAA

InterProScan

Gene3D
ARM-like (IPR011989) - T[9-192] 5.8E-7 - T[308-495] 1.6E-5
Pfam
PSMD5 (IPR019538) - T[17-523] 1.4E-120
PANTHER
PSMD5 (IPR019538) - T[22-523] 1.2E-144
SUPERFAMILY
ARM-type_fold (IPR016024) - T[32-444] 1.7E-27

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PSMD5_HUMAN 33.929 % 325 1.28E-105