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  1. Transcript 'KH2012:KH.L18.5.v1.A...' > 
  2. Transcript 'Harore.CG.MTP2014.S1...' > 
  3. Transcript 'KH2012:KH.C9.468.v1....'

Transcript Model

Transcript Id

KH2012:KH.C9.468.v1.A.nonSL3-1

Possible name(s)

PSMD5

Gene model

KH2012:KH.C9.468

Location

KhC9 [5,859,084 / 5,864,899]

Sequences

Amino acid sequence

Length: 525

>KH.C9.468.v1.A.nonSL3-1
SDSRRILYSKLIYCIKMDEGISSLIRNLSISDDRLQTLTEIKTFVVSSHSSTLKNVVQAS
DLETLFQCLENNDRDEVEAICFILSSLLPIVDPVDVAVKLASAIQNGLTHPNPDVQHLTL
KELQRVVAASDGATALSDSPDITRFAIFLVGDADESLAAAAVKFLSEFGRTSPNAARTML
KPDFQPHYRDLKTVMQKNDVVKFRVYEIVCNIQAESQEMLDLCVESGIVSDLVKELDGSD
VLGKVTCCTMLSGMASSNHSLDYLVQAGVVSKMTEMLKDSITDPFSDLYVPGVIRFFGNL
SLYNGPKFVLEIFPNFCKVIFTMVGSNDPPKQQVAMETLGIIGETLEGKKVLSEQGDDCT
TAVQDVCQILKHGKQDMRLIAVDCMSRLLDHKKVNENETDVAYKITLSWFRLLSSNPIDT
IINLCKQPFTDIRCSGFALLNTLADCQWGVEAMVEFATLVEFLLDRSTETEKSSKDAKFA
VIKTLTKSPNVASIFGNRNYLRFRQFLNEGPYYVGTQLSVAIDEA

Nucleotide sequence

Length: 1,793

>KH2012:KH.C9.468.v1.A.nonSL3-1
GTACATGGTACACATTTTCTTAGAGCGACTCAAGACGTATTTTGTACTCAAAGTTAATTT
ATTGCATTAAGATGGACGAAGGGATATCTAGTCTTATCCGTAACCTGTCAATTAGCGATG
ATCGACTTCAAACTTTGACCGAAATTAAAACGTTTGTTGTGAGTTCCCATTCGTCAACTT
TAAAGAATGTAGTGCAGGCGTCGGATTTGGAAACTCTGTTTCAATGCCTTGAAAACAACG
ACAGAGATGAAGTTGAAGCAATATGTTTCATTCTCTCGTCACTTCTTCCCATCGTTGACC
CAGTAGATGTAGCTGTTAAACTTGCCTCGGCAATTCAGAATGGACTCACTCATCCAAATC
CTGATGTGCAACACTTAACACTCAAAGAGCTACAAAGAGTTGTTGCTGCATCAGATGGCG
CCACAGCATTATCAGACTCCCCTGACATAACGAGGTTCGCTATTTTCTTGGTTGGTGACG
CAGATGAATCGTTAGCTGCTGCTGCTGTCAAATTTTTGTCGGAATTTGGGCGTACTTCAC
CCAACGCTGCTCGTACAATGCTTAAACCAGATTTCCAACCTCATTATAGAGACCTTAAGA
CTGTGATGCAGAAAAACGATGTTGTAAAGTTCAGAGTGTATGAGATTGTTTGCAACATTC
AAGCAGAATCTCAGGAAATGTTGGACCTTTGTGTAGAATCAGGAATTGTTAGCGATCTTG
TGAAAGAACTTGACGGTAGTGATGTGCTTGGGAAAGTTACTTGTTGTACAATGTTATCTG
GCATGGCATCTTCAAACCATAGTTTGGATTATTTGGTACAAGCTGGCGTCGTCTCTAAAA
TGACTGAAATGTTGAAGGATTCAATCACTGATCCATTCTCAGACCTTTATGTTCCAGGTG
TTATTCGATTTTTTGGTAACCTATCCCTCTACAATGGGCCTAAATTTGTGCTTGAAATCT
TTCCCAATTTCTGCAAAGTAATCTTCACTATGGTGGGAAGCAACGATCCACCAAAGCAAC
AGGTTGCCATGGAAACATTGGGGATAATAGGAGAGACGTTGGAAGGAAAGAAAGTTTTGT
CTGAACAAGGAGATGATTGTACCACCGCTGTACAAGATGTTTGCCAGATCTTAAAACACG
GAAAGCAAGACATGCGACTGATAGCTGTTGACTGTATGAGTCGTCTGCTGGATCATAAAA
AGGTCAATGAGAATGAGACAGATGTTGCATACAAGATCACATTGTCTTGGTTTCGACTTT
TATCAAGCAATCCAATTGACACGATCATCAACTTATGTAAACAACCATTTACGGATATTC
GATGCTCTGGATTTGCTTTGCTCAACACATTGGCCGACTGTCAGTGGGGTGTTGAAGCGA
TGGTGGAATTCGCTACGCTCGTCGAATTCCTGCTCGACAGGAGCACTGAGACCGAAAAAA
GCAGCAAAGACGCGAAGTTCGCAGTCATAAAAACTCTCACTAAATCTCCCAACGTTGCAA
GCATATTCGGCAACCGGAACTATCTTAGATTCAGACAATTCCTCAATGAAGGTCCGTATT
ATGTCGGGACTCAATTGTCAGTAGCCATTGACGAGGCTTGAGTTTTCAATAAATAAATGA
AATTTATTTTCATTCTTCGGTTCTTTATATAAGCTGCTATTTACGGCTATACTGCTGCAT
GGTTCGTCTGCTGAGTTGTTGTAACAAAGTACATGTTTTTTTTCAATATTGCTTGTTTTT
TATGGCCCTTTTATTTGGCTCCTTAATAAAACTTTTGTTTGAGAGTGGTTAAA

InterProScan

Gene3D
ARM-like (IPR011989) - T[9-192] 5.8E-7 - T[308-495] 1.6E-5
Pfam
PSMD5 (IPR019538) - T[17-523] 1.4E-120
PANTHER
PSMD5 (IPR019538) - T[22-523] 1.2E-144
SUPERFAMILY
ARM-type_fold (IPR016024) - T[32-444] 1.7E-27

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PSMD5_HUMAN 33.929 % 325 1.28E-105