Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.C9.468.v1....' > 
  2. Transcript 'Boleac.CG.SB_v3.S1.g...' > 
  3. Transcript 'KH2012:KH.L43.1.v1.A...' > 
  4. Transcript 'KH2012:KH.C9.468.v1....'

Transcript Model

Transcript Id

KH2012:KH.C9.468.v1.A.nonSL4-1

Possible name(s)

PSMD5

Gene model

KH2012:KH.C9.468

Location

KhC9 [5,859,062 / 5,864,899]

Sequences

Amino acid sequence

Length: 525

>KH.C9.468.v1.A.nonSL4-1
SDSRRILYSKLIYCIKMDEGISSLIRNLSISDDRLQTLTEIKTFVVSSHSSTLKNVVQAS
DLETLFQCLENNDRDEVEAICFILSSLLPIVDPVDVAVKLASAIQNGLTHPNPDVQHLTL
KELQRVVAASDGATALSDSPDITRFAIFLVGDADESLAAAAVKFLSEFGRTSPNAARTML
KPDFQPHYRDLKTVMQKNDVVKFRVYEIVCNIQAESQEMLDLCVESGIVSDLVKELDGSD
VLGKVTCCTMLSGMASSNHSLDYLVQAGVVSKMTEMLKDSITDPFSDLYVPGVIRFFGNL
SLYNGPKFVLEIFPNFCKVIFTMVGSNDPPKQQVAMETLGIIGETLEGKKVLSEQGDDCT
TAVQDVCQILKHGKQDMRLIAVDCMSRLLDHKKVNENETDVAYKITLSWFRLLSSNPIDT
IINLCKQPFTDIRCSGFALLNTLADCQWGVEAMVEFATLVEFLLDRSTETEKSSKDAKFA
VIKTLTKSPNVASIFGNRNYLRFRQFLNEGPYYVGTQLSVAIDEA

Nucleotide sequence

Length: 1,815

>KH2012:KH.C9.468.v1.A.nonSL4-1
ATTCTCGTACACCAAAACAATTGTACATGGTACACATTTTCTTAGAGCGACTCAAGACGT
ATTTTGTACTCAAAGTTAATTTATTGCATTAAGATGGACGAAGGGATATCTAGTCTTATC
CGTAACCTGTCAATTAGCGATGATCGACTTCAAACTTTGACCGAAATTAAAACGTTTGTT
GTGAGTTCCCATTCGTCAACTTTAAAGAATGTAGTGCAGGCGTCGGATTTGGAAACTCTG
TTTCAATGCCTTGAAAACAACGACAGAGATGAAGTTGAAGCAATATGTTTCATTCTCTCG
TCACTTCTTCCCATCGTTGACCCAGTAGATGTAGCTGTTAAACTTGCCTCGGCAATTCAG
AATGGACTCACTCATCCAAATCCTGATGTGCAACACTTAACACTCAAAGAGCTACAAAGA
GTTGTTGCTGCATCAGATGGCGCCACAGCATTATCAGACTCCCCTGACATAACGAGGTTC
GCTATTTTCTTGGTTGGTGACGCAGATGAATCGTTAGCTGCTGCTGCTGTCAAATTTTTG
TCGGAATTTGGGCGTACTTCACCCAACGCTGCTCGTACAATGCTTAAACCAGATTTCCAA
CCTCATTATAGAGACCTTAAGACTGTGATGCAGAAAAACGATGTTGTAAAGTTCAGAGTG
TATGAGATTGTTTGCAACATTCAAGCAGAATCTCAGGAAATGTTGGACCTTTGTGTAGAA
TCAGGAATTGTTAGCGATCTTGTGAAAGAACTTGACGGTAGTGATGTGCTTGGGAAAGTT
ACTTGTTGTACAATGTTATCTGGCATGGCATCTTCAAACCATAGTTTGGATTATTTGGTA
CAAGCTGGCGTCGTCTCTAAAATGACTGAAATGTTGAAGGATTCAATCACTGATCCATTC
TCAGACCTTTATGTTCCAGGTGTTATTCGATTTTTTGGTAACCTATCCCTCTACAATGGG
CCTAAATTTGTGCTTGAAATCTTTCCCAATTTCTGCAAAGTAATCTTCACTATGGTGGGA
AGCAACGATCCACCAAAGCAACAGGTTGCCATGGAAACATTGGGGATAATAGGAGAGACG
TTGGAAGGAAAGAAAGTTTTGTCTGAACAAGGAGATGATTGTACCACCGCTGTACAAGAT
GTTTGCCAGATCTTAAAACACGGAAAGCAAGACATGCGACTGATAGCTGTTGACTGTATG
AGTCGTCTGCTGGATCATAAAAAGGTCAATGAGAATGAGACAGATGTTGCATACAAGATC
ACATTGTCTTGGTTTCGACTTTTATCAAGCAATCCAATTGACACGATCATCAACTTATGT
AAACAACCATTTACGGATATTCGATGCTCTGGATTTGCTTTGCTCAACACATTGGCCGAC
TGTCAGTGGGGTGTTGAAGCGATGGTGGAATTCGCTACGCTCGTCGAATTCCTGCTCGAC
AGGAGCACTGAGACCGAAAAAAGCAGCAAAGACGCGAAGTTCGCAGTCATAAAAACTCTC
ACTAAATCTCCCAACGTTGCAAGCATATTCGGCAACCGGAACTATCTTAGATTCAGACAA
TTCCTCAATGAAGGTCCGTATTATGTCGGGACTCAATTGTCAGTAGCCATTGACGAGGCT
TGAGTTTTCAATAAATAAATGAAATTTATTTTCATTCTTCGGTTCTTTATATAAGCTGCT
ATTTACGGCTATACTGCTGCATGGTTCGTCTGCTGAGTTGTTGTAACAAAGTACATGTTT
TTTTTCAATATTGCTTGTTTTTTATGGCCCTTTTATTTGGCTCCTTAATAAAACTTTTGT
TTGAGAGTGGTTAAA

InterProScan

Gene3D
ARM-like (IPR011989) - T[9-192] 5.8E-7 - T[308-495] 1.6E-5
Pfam
PSMD5 (IPR019538) - T[17-523] 1.4E-120
PANTHER
PSMD5 (IPR019538) - T[22-523] 1.2E-144
SUPERFAMILY
ARM-type_fold (IPR016024) - T[32-444] 1.7E-27

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PSMD5_HUMAN 33.929 % 325 1.28E-105