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  1. Transcript 'KH2012:KH.C9.468.v1....'

Transcript Model

Transcript Id

KH2012:KH.C9.468.v1.A.SL13-1

Possible name(s)

PSMD5

Gene model

KH2012:KH.C9.468

Location

KhC9 [5,859,155 / 5,864,899]

Sequences

Amino acid sequence

Length: 509

>KH.C9.468.v1.A.SL13-1
MDEGISSLIRNLSISDDRLQTLTEIKTFVVSSHSSTLKNVVQASDLETLFQCLENNDRDE
VEAICFILSSLLPIVDPVDVAVKLASAIQNGLTHPNPDVQHLTLKELQRVVAASDGATAL
SDSPDITRFAIFLVGDADESLAAAAVKFLSEFGRTSPNAARTMLKPDFQPHYRDLKTVMQ
KNDVVKFRVYEIVCNIQAESQEMLDLCVESGIVSDLVKELDGSDVLGKVTCCTMLSGMAS
SNHSLDYLVQAGVVSKMTEMLKDSITDPFSDLYVPGVIRFFGNLSLYNGPKFVLEIFPNF
CKVIFTMVGSNDPPKQQVAMETLGIIGETLEGKKVLSEQGDDCTTAVQDVCQILKHGKQD
MRLIAVDCMSRLLDHKKVNENETDVAYKITLSWFRLLSSNPIDTIINLCKQPFTDIRCSG
FALLNTLADCQWGVEAMVEFATLVEFLLDRSTETEKSSKDAKFAVIKTLTKSPNVASIFG
NRNYLRFRQFLNEGPYYVGTQLSVAIDEA

Nucleotide sequence

Length: 1,722

>KH2012:KH.C9.468.v1.A.SL13-1
ATGGACGAAGGGATATCTAGTCTTATCCGTAACCTGTCAATTAGCGATGATCGACTTCAA
ACTTTGACCGAAATTAAAACGTTTGTTGTGAGTTCCCATTCGTCAACTTTAAAGAATGTA
GTGCAGGCGTCGGATTTGGAAACTCTGTTTCAATGCCTTGAAAACAACGACAGAGATGAA
GTTGAAGCAATATGTTTCATTCTCTCGTCACTTCTTCCCATCGTTGACCCAGTAGATGTA
GCTGTTAAACTTGCCTCGGCAATTCAGAATGGACTCACTCATCCAAATCCTGATGTGCAA
CACTTAACACTCAAAGAGCTACAAAGAGTTGTTGCTGCATCAGATGGCGCCACAGCATTA
TCAGACTCCCCTGACATAACGAGGTTCGCTATTTTCTTGGTTGGTGACGCAGATGAATCG
TTAGCTGCTGCTGCTGTCAAATTTTTGTCGGAATTTGGGCGTACTTCACCCAACGCTGCT
CGTACAATGCTTAAACCAGATTTCCAACCTCATTATAGAGACCTTAAGACTGTGATGCAG
AAAAACGATGTTGTAAAGTTCAGAGTGTATGAGATTGTTTGCAACATTCAAGCAGAATCT
CAGGAAATGTTGGACCTTTGTGTAGAATCAGGAATTGTTAGCGATCTTGTGAAAGAACTT
GACGGTAGTGATGTGCTTGGGAAAGTTACTTGTTGTACAATGTTATCTGGCATGGCATCT
TCAAACCATAGTTTGGATTATTTGGTACAAGCTGGCGTCGTCTCTAAAATGACTGAAATG
TTGAAGGATTCAATCACTGATCCATTCTCAGACCTTTATGTTCCAGGTGTTATTCGATTT
TTTGGTAACCTATCCCTCTACAATGGGCCTAAATTTGTGCTTGAAATCTTTCCCAATTTC
TGCAAAGTAATCTTCACTATGGTGGGAAGCAACGATCCACCAAAGCAACAGGTTGCCATG
GAAACATTGGGGATAATAGGAGAGACGTTGGAAGGAAAGAAAGTTTTGTCTGAACAAGGA
GATGATTGTACCACCGCTGTACAAGATGTTTGCCAGATCTTAAAACACGGAAAGCAAGAC
ATGCGACTGATAGCTGTTGACTGTATGAGTCGTCTGCTGGATCATAAAAAGGTCAATGAG
AATGAGACAGATGTTGCATACAAGATCACATTGTCTTGGTTTCGACTTTTATCAAGCAAT
CCAATTGACACGATCATCAACTTATGTAAACAACCATTTACGGATATTCGATGCTCTGGA
TTTGCTTTGCTCAACACATTGGCCGACTGTCAGTGGGGTGTTGAAGCGATGGTGGAATTC
GCTACGCTCGTCGAATTCCTGCTCGACAGGAGCACTGAGACCGAAAAAAGCAGCAAAGAC
GCGAAGTTCGCAGTCATAAAAACTCTCACTAAATCTCCCAACGTTGCAAGCATATTCGGC
AACCGGAACTATCTTAGATTCAGACAATTCCTCAATGAAGGTCCGTATTATGTCGGGACT
CAATTGTCAGTAGCCATTGACGAGGCTTGAGTTTTCAATAAATAAATGAAATTTATTTTC
ATTCTTCGGTTCTTTATATAAGCTGCTATTTACGGCTATACTGCTGCATGGTTCGTCTGC
TGAGTTGTTGTAACAAAGTACATGTTTTTTTTCAATATTGCTTGTTTTTTATGGCCCTTT
TATTTGGCTCCTTAATAAAACTTTTGTTTGAGAGTGGTTAAA

InterProScan

Pfam
PSMD5 (IPR019538) - T[1-507] 1.2E-120
Gene3D
ARM-like (IPR011989) - T[2-176] 8.4E-7 - T[177-477] 1.3E-16
PANTHER
PSMD5 (IPR019538) - T[6-507] 1.1E-144
SUPERFAMILY
ARM-type_fold (IPR016024) - T[16-428] 1.43E-27

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PSMD5_HUMAN 33.929 % 325 6.92E-106