Aniseed - Transcript Card

Clone 'ma128k03' >
Clone 'AHC0AAA76YH16' >
Transcript 'KH2012:KH.C9.489.v1....'

Transcript Model

Transcript Id

KH2012:KH.C9.489.v1.B.ND1-1

Possible name(s)

ACSF2; ACSM4; ACSM5

Gene model

KH2012:KH.C9.489

Location

KhC9 [3,746,202 / 3,750,316]

Sequences

Amino acid sequence

Length: 504

>KH.C9.489.v1.B.ND1-1
MVLTRPNDLPLPSVGYSSYYLPILKGFGENIALVDIGNEEASYTFSQVHDNSIKYANLLI
KLGIGNGDVIALCCGNCAEYLMLLLAAAELGVSVTTCNPKHTQSEMIHQFNVVAPKLVIA
DSNIVEKLEHVSEAVTAIKKIATLGKHEKYICLRQSLNQESSVKEYVPVTSKRDISNTPF
VLPFSSGTTGKPKAVQHSQAIYTAYTLLWSHIKASQPRNMLLHCTNVSYVWNENLQKYDL
SSMEYILSAAAPLPVKVGDNLRELWKTVKINQCYGMSEAAPLSGCLEPDCPKESVGRLAF
NLQVKVVDVKTGKELGPNLDGELRYKGPQVFMGYYNAPEATRNSFDEDNWFRSGDIGHYD
ERGYIYIVDRLKDLIKYKGFQVSPAEIERVLFENPKIADAAVFGVPDNEAGELPRAFIVK
RKESLTASEVHEYLKGKTFNFSHIVVYIACQVTSNCVEVLSFEIRFRKHRVGRLSEGHCG
LLRVNCRSCVNNQSITVNTKVCV+

Nucleotide sequence

Length: 1,509

>KH2012:KH.C9.489.v1.B.ND1-1
ATGGTGCTGACACGTCCTAATGATTTGCCTTTGCCAAGTGTAGGCTACAGCAGTTACTAT
CTTCCGATACTAAAGGGCTTCGGAGAGAATATAGCTCTGGTTGATATTGGAAACGAAGAA
GCAAGCTACACTTTCTCACAAGTACATGACAACTCAATCAAATATGCAAACCTACTAATA
AAGTTAGGTATTGGCAACGGAGATGTTATTGCTCTCTGCTGTGGAAACTGCGCAGAGTAT
TTAATGCTATTATTAGCTGCTGCTGAATTGGGTGTGAGTGTTACAACCTGTAATCCAAAA
CACACACAAAGTGAAATGATTCATCAGTTCAATGTTGTTGCACCAAAACTTGTAATTGCC
GATTCAAATATCGTGGAAAAACTGGAGCATGTTTCAGAAGCTGTAACTGCCATCAAGAAA
ATAGCGACGCTTGGAAAACATGAGAAATATATCTGCTTACGGCAATCATTAAATCAAGAA
TCTTCTGTGAAAGAGTACGTTCCAGTGACGTCCAAACGAGACATTAGCAATACACCTTTT
GTTCTCCCGTTTTCTAGCGGGACCACTGGAAAACCAAAAGCAGTTCAACATTCTCAAGCT
ATATATACTGCATACACCTTGCTATGGTCCCACATTAAAGCTTCCCAACCACGGAATATG
TTATTGCATTGTACCAATGTTTCATATGTTTGGAATGAAAACTTGCAAAAGTACGATTTG
TCGTCCATGGAATACATTCTGTCTGCAGCAGCCCCTTTGCCAGTAAAAGTTGGTGACAAC
TTGAGGGAGCTTTGGAAAACCGTCAAGATAAACCAATGTTATGGGATGAGTGAAGCCGCG
CCACTGTCAGGTTGTCTGGAGCCGGACTGTCCAAAAGAATCAGTTGGTCGTTTAGCGTTT
AATTTGCAAGTGAAGGTTGTAGATGTTAAGACTGGCAAAGAACTGGGTCCGAATCTAGAC
GGAGAGTTACGGTACAAGGGGCCTCAGGTATTTATGGGCTATTACAATGCTCCAGAAGCG
ACAAGGAACAGTTTTGATGAAGACAATTGGTTTCGGAGTGGAGATATTGGGCACTATGAC
GAAAGAGGTTACATTTATATTGTAGATCGGTTGAAAGACTTGATCAAATATAAAGGATTT
CAGGTATCACCGGCCGAGATAGAACGCGTTCTATTTGAAAACCCTAAAATTGCTGACGCA
GCAGTATTTGGAGTGCCTGATAATGAAGCGGGAGAACTTCCGAGAGCTTTTATAGTAAAG
AGGAAGGAATCTCTGACCGCCTCAGAGGTGCACGAGTATTTAAAAGGTAAAACGTTTAAC
TTTTCACATATAGTAGTGTATATCGCCTGTCAAGTTACAAGCAACTGCGTGGAGGTATTA
TCTTTCGAGATTCGATTCCGAAAGCACAGAGTGGGAAGGTTATCAGAAGGTCACTGCGGT
CTGTTGAGAGTAAACTGTAGAAGTTGTGTGAATAATCAAAGTATTACTGTAAATACAAAA
GTATGTGTA

InterProScan

Pfam	AMP-dep_Synth/Lig (IPR000873) - T[27-209] 7.0E-31 - T[234-377] 1.8E-41
ProSitePatterns	AMP-binding_CS (IPR020845) - T[182-193] .
Pfam	AMP-bd_C (IPR025110) - T[386-436] 2.7E-8

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ACSF2_HUMAN	24.008 %	126	5.02E-31
ACS2A_HUMAN	22.292 %	101	1.04E-22
ACSM5_HUMAN	22.951 %	103	1.47E-23