- Transcript 'KH2012:KH.C9.606.v1....' >
- Clone 'cima824317' >
- Transcript 'KH2012:KH.C9.606.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.606.v1.A.nonSL12-1
Possible name(s)
TUBB2A; TUBB2B; TUBB4B
Gene model
Location
KhC9 [3,589,421 / 3,591,399]
Amino acid sequence
Length: 451
>KH.C9.606.v1.A.nonSL12-1
CLTIIMREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEAT
GGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDS
VLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKV
SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSG
VTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD
AKNMMAACDPRHGRYLTVATMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCD
IPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM
NDLVSEYQQYQDATAEEEGEFDEEEGEDEEA
Nucleotide sequence
Length: 1,457
>KH2012:KH.C9.606.v1.A.nonSL12-1
CCTGTTTAACGATAATCATGCGTGAAATAGTACATTTGCAAGCTGGACAATGTGGAAACC
AAATTGGTGCCAAGTTCTGGGAGGTAATCAGTGATGAACACGGAATTGACCCAACTGGAA
CCTACCATGGAGATAGTGATTTACAGCTGGAAAGAATAAATGTTTATTATAATGAAGCAA
CTGGAGGAAAATATGTCCCAAGAGCTATTTTAGTCGATTTAGAACCCGGAACCATGGATT
CTGTTCGATCTGGCCCATTCGGTCAAATTTTCAGACCAGACAACTTTGTGTTTGGACAAA
GTGGAGCTGGTAATAATTGGGCGAAGGGTCATTACACTGAAGGAGCTGAACTTGTTGATT
CAGTTCTTGATGTTGTAAGGAAGGAAGCGGAAAGCTGTGATTGTTTGCAGGGATTCCAAC
TAACACATTCACTTGGTGGTGGAACAGGTTCCGGGATGGGAACTTTGCTTATTAGTAAAA
TTAGAGAAGAATATCCGGATAGAATTATGAACACCTTCAGCGTTGTTCCTTCGCCAAAAG
TTTCCGACACCGTTGTTGAACCGTACAACGCAACTTTGTCCGTTCATCAACTTGTTGAAA
ACACGGATGAAACTTATTGTATTGATAACGAGGCTCTTTATGACATTTGCTTCCGTACAT
TAAAATTAACAACACCAACATATGGTGACTTGAACCACTTGGTATCCGCAACTATGAGTG
GAGTCACAACTTGTTTGAGATTCCCAGGTCAACTTAACGCTGATCTTCGCAAACTTGCGG
TTAACATGGTTCCCTTCCCTCGTCTCCACTTCTTCATGCCCGGGTTCGCTCCTTTGACGA
GTCGTGGAAGTCAACAATATCGAGCGTTGACCGTTCCTGAACTAACGCAGCAGATGTTCG
ATGCCAAGAACATGATGGCTGCGTGTGATCCTCGTCATGGTCGATACCTCACCGTGGCAA
CAATGTTCCGTGGGAGAATGTCCATGAAGGAAGTCGATGAACAAATGTTGAATGTTCAAA
ATAAAAACAGTTCCTACTTCGTTGAGTGGATTCCAAACAACGTGAAAACCGCTGTTTGTG
ATATTCCTCCACGTGGTTTGAAGATGGCGGCAACATTTGTTGGAAACAGCACAGCTATCC
AAGAATTGTTCAAACGTATTTCTGAGCAATTTACTGCCATGTTCCGAAGAAAGGCTTTCT
TGCATTGGTACACTGGTGAAGGTATGGATGAGATGGAATTCACTGAAGCTGAAAGCAACA
TGAATGATCTTGTGAGCGAATATCAACAATACCAAGATGCTACAGCTGAGGAGGAAGGAG
AGTTTGATGAAGAGGAAGGAGAAGATGAAGAAGCCTAAATGTCATCAAAGATTTTTAAAA
TTTTCACATAATTTGCAGTAAAATATTTTTCATTAAGTAAACAGGAAAATAAAGTTTGGG
AGAAACGAGAGTTTTGA
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[6-268] 2.0E-128 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[6-248] 1.44E-102 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[8-216] 9.7E-69 |
| PRINTS |
Tubulin (IPR000217) - T[15-35] 2.6E-105 - T[56-75] 2.6E-105 - T[98-109] 2.6E-105 - T[111-135] 2.6E-105 - T[137-155] 2.6E-105 - T[156-177] 2.6E-105 - T[181-194] 2.6E-105 - T[195-215] 2.6E-105 - T[375-403] 2.6E-105 |
| PANTHER |
Tubulin (IPR000217) - T[16-448] 0.0 |
| PANTHER |
Beta_tubulin (IPR002453) - T[16-448] 0.0 |
| PRINTS |
Beta_tubulin (IPR002453) - T[46-63] 2.2E-123 - T[93-104] 2.2E-123 - T[113-131] 2.2E-123 - T[157-169] 2.2E-123 - T[217-229] 2.2E-123 - T[235-244] 2.2E-123 - T[250-263] 2.2E-123 - T[270-286] 2.2E-123 - T[316-334] 2.2E-123 - T[334-348] 2.2E-123 - T[352-375] 2.2E-123 - T[382-393] 2.2E-123 - T[417-435] 2.2E-123 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[52-249] 3.0E-69 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[145-151] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[249-434] 5.49E-84 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[251-388] 4.9E-51 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[266-386] 3.5E-42 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[269-378] 3.6E-57 |
| Gene3D |
Tubulin_C (IPR023123) - T[379-450] 3.2E-36 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBB4B_HUMAN | 97.982 % | 920 | 0 |
| TBB2B_HUMAN | 97.072 % | 918 | 0 |
| TBB2A_HUMAN | 96.622 % | 913 | 0 |