- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'KH2012:KH.C9.606.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.606.v1.A.nonSL13-1
Possible name(s)
TUBB2A; TUBB2B; TUBB4B
Gene model
Location
KhC9 [3,589,421 / 3,591,386]
Amino acid sequence
Length: 447
>KH.C9.606.v1.A.nonSL13-1
IMREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKY
VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV
VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTV
VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTC
LRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNM
MAACDPRHGRYLTVATMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR
GLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
SEYQQYQDATAEEEGEFDEEEGEDEEA
Nucleotide sequence
Length: 1,444
>KH2012:KH.C9.606.v1.A.nonSL13-1
AATCATGCGTGAAATAGTACATTTGCAAGCTGGACAATGTGGAAACCAAATTGGTGCCAA
GTTCTGGGAGGTAATCAGTGATGAACACGGAATTGACCCAACTGGAACCTACCATGGAGA
TAGTGATTTACAGCTGGAAAGAATAAATGTTTATTATAATGAAGCAACTGGAGGAAAATA
TGTCCCAAGAGCTATTTTAGTCGATTTAGAACCCGGAACCATGGATTCTGTTCGATCTGG
CCCATTCGGTCAAATTTTCAGACCAGACAACTTTGTGTTTGGACAAAGTGGAGCTGGTAA
TAATTGGGCGAAGGGTCATTACACTGAAGGAGCTGAACTTGTTGATTCAGTTCTTGATGT
TGTAAGGAAGGAAGCGGAAAGCTGTGATTGTTTGCAGGGATTCCAACTAACACATTCACT
TGGTGGTGGAACAGGTTCCGGGATGGGAACTTTGCTTATTAGTAAAATTAGAGAAGAATA
TCCGGATAGAATTATGAACACCTTCAGCGTTGTTCCTTCGCCAAAAGTTTCCGACACCGT
TGTTGAACCGTACAACGCAACTTTGTCCGTTCATCAACTTGTTGAAAACACGGATGAAAC
TTATTGTATTGATAACGAGGCTCTTTATGACATTTGCTTCCGTACATTAAAATTAACAAC
ACCAACATATGGTGACTTGAACCACTTGGTATCCGCAACTATGAGTGGAGTCACAACTTG
TTTGAGATTCCCAGGTCAACTTAACGCTGATCTTCGCAAACTTGCGGTTAACATGGTTCC
CTTCCCTCGTCTCCACTTCTTCATGCCCGGGTTCGCTCCTTTGACGAGTCGTGGAAGTCA
ACAATATCGAGCGTTGACCGTTCCTGAACTAACGCAGCAGATGTTCGATGCCAAGAACAT
GATGGCTGCGTGTGATCCTCGTCATGGTCGATACCTCACCGTGGCAACAATGTTCCGTGG
GAGAATGTCCATGAAGGAAGTCGATGAACAAATGTTGAATGTTCAAAATAAAAACAGTTC
CTACTTCGTTGAGTGGATTCCAAACAACGTGAAAACCGCTGTTTGTGATATTCCTCCACG
TGGTTTGAAGATGGCGGCAACATTTGTTGGAAACAGCACAGCTATCCAAGAATTGTTCAA
ACGTATTTCTGAGCAATTTACTGCCATGTTCCGAAGAAAGGCTTTCTTGCATTGGTACAC
TGGTGAAGGTATGGATGAGATGGAATTCACTGAAGCTGAAAGCAACATGAATGATCTTGT
GAGCGAATATCAACAATACCAAGATGCTACAGCTGAGGAGGAAGGAGAGTTTGATGAAGA
GGAAGGAGAAGATGAAGAAGCCTAAATGTCATCAAAGATTTTTAAAATTTTCACATAATT
TGCAGTAAAATATTTTTCATTAAGTAAACAGGAAAATAAAGTTTGGGAGAAACGAGAGTT
TTGA
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[2-244] 1.44E-102 |
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[2-264] 1.9E-128 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[4-212] 9.5E-69 |
| PRINTS |
Tubulin (IPR000217) - T[11-31] 2.5E-105 - T[52-71] 2.5E-105 - T[94-105] 2.5E-105 - T[107-131] 2.5E-105 - T[133-151] 2.5E-105 - T[152-173] 2.5E-105 - T[177-190] 2.5E-105 - T[191-211] 2.5E-105 - T[371-399] 2.5E-105 |
| PANTHER |
Beta_tubulin (IPR002453) - T[13-444] 0.0 |
| PANTHER |
Tubulin (IPR000217) - T[13-444] 0.0 |
| PRINTS |
Beta_tubulin (IPR002453) - T[42-59] 2.0E-123 - T[89-100] 2.0E-123 - T[109-127] 2.0E-123 - T[153-165] 2.0E-123 - T[213-225] 2.0E-123 - T[231-240] 2.0E-123 - T[246-259] 2.0E-123 - T[266-282] 2.0E-123 - T[312-330] 2.0E-123 - T[330-344] 2.0E-123 - T[348-371] 2.0E-123 - T[378-389] 2.0E-123 - T[413-431] 2.0E-123 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[48-245] 3.0E-69 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[141-147] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[245-430] 5.19E-84 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[247-384] 4.9E-51 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[262-382] 3.4E-42 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[265-374] 3.5E-57 |
| Gene3D |
Tubulin_C (IPR023123) - T[375-446] 3.2E-36 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBB4B_HUMAN | 97.982 % | 920 | 0 |
| TBB2B_HUMAN | 97.072 % | 918 | 0 |
| TBB2A_HUMAN | 96.622 % | 913 | 0 |