Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 453

>KH.C9.606.v1.A.nonSL3-1
YSCLTIIMREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNE
ATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELV
DSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSP
KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATM
SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQM
FDAKNMMAACDPRHGRYLTVATMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAV
CDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
NMNDLVSEYQQYQDATAEEEGEFDEEEGEDEEA

Nucleotide sequence

Length: 1,500

>KH2012:KH.C9.606.v1.A.nonSL3-1
ATTTATTTTTAGACAGCCTCCCAGGATATAGTTATATAATATTCCTGTTTAACGATAATC
ATGCGTGAAATAGTACATTTGCAAGCTGGACAATGTGGAAACCAAATTGGTGCCAAGTTC
TGGGAGGTAATCAGTGATGAACACGGAATTGACCCAACTGGAACCTACCATGGAGATAGT
GATTTACAGCTGGAAAGAATAAATGTTTATTATAATGAAGCAACTGGAGGAAAATATGTC
CCAAGAGCTATTTTAGTCGATTTAGAACCCGGAACCATGGATTCTGTTCGATCTGGCCCA
TTCGGTCAAATTTTCAGACCAGACAACTTTGTGTTTGGACAAAGTGGAGCTGGTAATAAT
TGGGCGAAGGGTCATTACACTGAAGGAGCTGAACTTGTTGATTCAGTTCTTGATGTTGTA
AGGAAGGAAGCGGAAAGCTGTGATTGTTTGCAGGGATTCCAACTAACACATTCACTTGGT
GGTGGAACAGGTTCCGGGATGGGAACTTTGCTTATTAGTAAAATTAGAGAAGAATATCCG
GATAGAATTATGAACACCTTCAGCGTTGTTCCTTCGCCAAAAGTTTCCGACACCGTTGTT
GAACCGTACAACGCAACTTTGTCCGTTCATCAACTTGTTGAAAACACGGATGAAACTTAT
TGTATTGATAACGAGGCTCTTTATGACATTTGCTTCCGTACATTAAAATTAACAACACCA
ACATATGGTGACTTGAACCACTTGGTATCCGCAACTATGAGTGGAGTCACAACTTGTTTG
AGATTCCCAGGTCAACTTAACGCTGATCTTCGCAAACTTGCGGTTAACATGGTTCCCTTC
CCTCGTCTCCACTTCTTCATGCCCGGGTTCGCTCCTTTGACGAGTCGTGGAAGTCAACAA
TATCGAGCGTTGACCGTTCCTGAACTAACGCAGCAGATGTTCGATGCCAAGAACATGATG
GCTGCGTGTGATCCTCGTCATGGTCGATACCTCACCGTGGCAACAATGTTCCGTGGGAGA
ATGTCCATGAAGGAAGTCGATGAACAAATGTTGAATGTTCAAAATAAAAACAGTTCCTAC
TTCGTTGAGTGGATTCCAAACAACGTGAAAACCGCTGTTTGTGATATTCCTCCACGTGGT
TTGAAGATGGCGGCAACATTTGTTGGAAACAGCACAGCTATCCAAGAATTGTTCAAACGT
ATTTCTGAGCAATTTACTGCCATGTTCCGAAGAAAGGCTTTCTTGCATTGGTACACTGGT
GAAGGTATGGATGAGATGGAATTCACTGAAGCTGAAAGCAACATGAATGATCTTGTGAGC
GAATATCAACAATACCAAGATGCTACAGCTGAGGAGGAAGGAGAGTTTGATGAAGAGGAA
GGAGAAGATGAAGAAGCCTAAATGTCATCAAAGATTTTTAAAATTTTCACATAATTTGCA
GTAAAATATTTTTCATTAAGTAAACAGGAAAATAAAGTTTGGGAGAAACGAGAGTTTTGA

InterProScan

Gene3D	Tubulin/FtsZ_GTPase_sf (IPR036525) - T[8-270] 2.0E-128
SUPERFAMILY	Tubulin/FtsZ_GTPase_sf (IPR036525) - T[8-250] 1.44E-102
Pfam	Tubulin_FtsZ_GTPase (IPR003008) - T[10-218] 9.8E-69
PANTHER	Beta_tubulin (IPR002453) - T[17-450] 0.0
PANTHER	Tubulin (IPR000217) - T[17-450] 0.0
PRINTS	Tubulin (IPR000217) - T[17-37] 2.7E-105 - T[58-77] 2.7E-105 - T[100-111] 2.7E-105 - T[113-137] 2.7E-105 - T[139-157] 2.7E-105 - T[158-179] 2.7E-105 - T[183-196] 2.7E-105 - T[197-217] 2.7E-105 - T[377-405] 2.7E-105
PRINTS	Beta_tubulin (IPR002453) - T[48-65] 2.3E-123 - T[95-106] 2.3E-123 - T[115-133] 2.3E-123 - T[159-171] 2.3E-123 - T[219-231] 2.3E-123 - T[237-246] 2.3E-123 - T[252-265] 2.3E-123 - T[272-288] 2.3E-123 - T[318-336] 2.3E-123 - T[336-350] 2.3E-123 - T[354-377] 2.3E-123 - T[384-395] 2.3E-123 - T[419-437] 2.3E-123
SMART	Tubulin_FtsZ_GTPase (IPR003008) - T[54-251] 3.0E-69
ProSitePatterns	Tubulin_CS (IPR017975) - T[147-153] .
SUPERFAMILY	Tub_FtsZ_C (IPR008280) - T[251-436] 5.49E-84
SMART	Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[253-390] 4.9E-51
Pfam	Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[268-388] 3.5E-42
Gene3D	Tubulin/FtsZ_C_sf (IPR037103) - T[271-380] 3.6E-57
Gene3D	Tubulin_C (IPR023123) - T[381-452] 3.2E-36