- Transcript 'KH2012:KH.C9.606.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.606.v1.A.SL1-1
Possible name(s)
TUBB2A; TUBB2B; TUBB4B
Gene model
Location
KhC9 [3,589,421 / 3,591,430]
Amino acid sequence
Length: 453
>KH.C9.606.v1.A.SL1-1
YSCLTIIMREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNE
ATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELV
DSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSP
KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATM
SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQM
FDAKNMMAACDPRHGRYLTVATMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAV
CDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
NMNDLVSEYQQYQDATAEEEGEFDEEEGEDEEA
Nucleotide sequence
Length: 1,488
>KH2012:KH.C9.606.v1.A.SL1-1
ACAGCCTCCCAGGATATAGTTATATAATATTCCTGTTTAACGATAATCATGCGTGAAATA
GTACATTTGCAAGCTGGACAATGTGGAAACCAAATTGGTGCCAAGTTCTGGGAGGTAATC
AGTGATGAACACGGAATTGACCCAACTGGAACCTACCATGGAGATAGTGATTTACAGCTG
GAAAGAATAAATGTTTATTATAATGAAGCAACTGGAGGAAAATATGTCCCAAGAGCTATT
TTAGTCGATTTAGAACCCGGAACCATGGATTCTGTTCGATCTGGCCCATTCGGTCAAATT
TTCAGACCAGACAACTTTGTGTTTGGACAAAGTGGAGCTGGTAATAATTGGGCGAAGGGT
CATTACACTGAAGGAGCTGAACTTGTTGATTCAGTTCTTGATGTTGTAAGGAAGGAAGCG
GAAAGCTGTGATTGTTTGCAGGGATTCCAACTAACACATTCACTTGGTGGTGGAACAGGT
TCCGGGATGGGAACTTTGCTTATTAGTAAAATTAGAGAAGAATATCCGGATAGAATTATG
AACACCTTCAGCGTTGTTCCTTCGCCAAAAGTTTCCGACACCGTTGTTGAACCGTACAAC
GCAACTTTGTCCGTTCATCAACTTGTTGAAAACACGGATGAAACTTATTGTATTGATAAC
GAGGCTCTTTATGACATTTGCTTCCGTACATTAAAATTAACAACACCAACATATGGTGAC
TTGAACCACTTGGTATCCGCAACTATGAGTGGAGTCACAACTTGTTTGAGATTCCCAGGT
CAACTTAACGCTGATCTTCGCAAACTTGCGGTTAACATGGTTCCCTTCCCTCGTCTCCAC
TTCTTCATGCCCGGGTTCGCTCCTTTGACGAGTCGTGGAAGTCAACAATATCGAGCGTTG
ACCGTTCCTGAACTAACGCAGCAGATGTTCGATGCCAAGAACATGATGGCTGCGTGTGAT
CCTCGTCATGGTCGATACCTCACCGTGGCAACAATGTTCCGTGGGAGAATGTCCATGAAG
GAAGTCGATGAACAAATGTTGAATGTTCAAAATAAAAACAGTTCCTACTTCGTTGAGTGG
ATTCCAAACAACGTGAAAACCGCTGTTTGTGATATTCCTCCACGTGGTTTGAAGATGGCG
GCAACATTTGTTGGAAACAGCACAGCTATCCAAGAATTGTTCAAACGTATTTCTGAGCAA
TTTACTGCCATGTTCCGAAGAAAGGCTTTCTTGCATTGGTACACTGGTGAAGGTATGGAT
GAGATGGAATTCACTGAAGCTGAAAGCAACATGAATGATCTTGTGAGCGAATATCAACAA
TACCAAGATGCTACAGCTGAGGAGGAAGGAGAGTTTGATGAAGAGGAAGGAGAAGATGAA
GAAGCCTAAATGTCATCAAAGATTTTTAAAATTTTCACATAATTTGCAGTAAAATATTTT
TCATTAAGTAAACAGGAAAATAAAGTTTGGGAGAAACGAGAGTTTTGA
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[8-270] 2.0E-128 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[8-250] 1.44E-102 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[10-218] 9.8E-69 |
| PANTHER |
Beta_tubulin (IPR002453) - T[17-450] 0.0 |
| PANTHER |
Tubulin (IPR000217) - T[17-450] 0.0 |
| PRINTS |
Tubulin (IPR000217) - T[17-37] 2.7E-105 - T[58-77] 2.7E-105 - T[100-111] 2.7E-105 - T[113-137] 2.7E-105 - T[139-157] 2.7E-105 - T[158-179] 2.7E-105 - T[183-196] 2.7E-105 - T[197-217] 2.7E-105 - T[377-405] 2.7E-105 |
| PRINTS |
Beta_tubulin (IPR002453) - T[48-65] 2.3E-123 - T[95-106] 2.3E-123 - T[115-133] 2.3E-123 - T[159-171] 2.3E-123 - T[219-231] 2.3E-123 - T[237-246] 2.3E-123 - T[252-265] 2.3E-123 - T[272-288] 2.3E-123 - T[318-336] 2.3E-123 - T[336-350] 2.3E-123 - T[354-377] 2.3E-123 - T[384-395] 2.3E-123 - T[419-437] 2.3E-123 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[54-251] 3.0E-69 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[147-153] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[251-436] 5.49E-84 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[253-390] 4.9E-51 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[268-388] 3.5E-42 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[271-380] 3.6E-57 |
| Gene3D |
Tubulin_C (IPR023123) - T[381-452] 3.2E-36 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBB4B_HUMAN | 97.982 % | 920 | 0 |
| TBB2B_HUMAN | 97.072 % | 918 | 0 |
| TBB2A_HUMAN | 96.622 % | 914 | 0 |