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  1. Transcript 'Phmamm.CG.MTP2014.S4...'
  2. Transcript 'KH2012:KH.C6.158.v1....'
  3. Transcript 'KH2012:KH.C9.622.v2....'

Transcript Model

Transcript Id

KH2012:KH.C9.622.v2.R.ND1-1

Possible name(s)

DEAF1; RUNX1T1

Location

KhC9 [5,494,984 / 5,499,193]

Sequences

Amino acid sequence

Length: 576

>KH.C9.622.v2.R.ND1-1
FQQLEHMSIKEQQTSKQRNRLSLIRTIIHKLLVKSCITLSVVGKNECQILHPSPLQTTVK
ATTVCISDTSPQSMTSFVMTQLRSDAVKLSKVVDEIGRRHLSPKETNIIDVDALFEDLPT
VLPRTNSRTTNTSFKPFNATSSAAPTVGYRRRSNPGFVSIPTSSTAPRFSTIRLDQTRVA
PSHARVSQSNSAPPDPVLISGVSTNRASITKISRPHSNSFDNSRFQRMSITPQQSQPQIR
QHKPLPRTDHFYQPTVGHIVLGPPRPVVPSHMQQMPHMQNQVQHEQSQLQHPKNQQQLPF
VRNQYGTNRPFQQQPRHQLPINHPDAVTELRNISRDKDGFRVPIKPTPVHSGRYYAPAMV
LNSPSGRYPVSQPTYTQSQVQQSVVQGIRPVIPRSPSIRAPTGGVSINSSPIHQQPRHSY
NHQLKESYLSVRTPLAPGDAQRYSAHLKAQQNELHHKIESLKALEQKIQTAPALNVVKHT
QASPATSQIYRTSSIMQTDFRKRKMKLPVSSPNPLSEKLRKMTPQGGANGNQVATEESCT
VCKERAYFVCSGCHGVWYCSKYCQFQDWSSHSKRCI

Nucleotide sequence

Length: 3,175

>KH2012:KH.C9.622.v2.R.ND1-1
GTTTGGAAAATAATAGTAACCAATGTAAAAATTGGCAAAAATTGTTTTATATTACGACTA
ATTTTTCTGTATGACGTGCATAGCAAAGCAACAACTAGTGGTGGAGGAGAAGGAACAAAC
TGAACTACGGCTCGCCATGGAATTTCCGCGACATAATTGGCTCGTAAAACATTTAATGAA
AGAAAAACGAATAGAGAATGATGAAGCGGCTACTACTGAATCTGATTCGCCTACAGCACC
CACCCATAAGAATACTGCCGCAAAATCTAGAACTTCGACTCCAAGAAGTAGCCCATCCCC
AAAAGAAGGTTCGCCACACCCAGAAAAGCAAGATACAGTAAATCTAAAAGAGACCCAAGA
AAACGAAGACGTAAGCATTGATGTCCCAGAGAAGCAAGTTGCCGCTGATCCTGCTAAAAA
AGCGGATGGTTCAAATCATATTGCAATTACGTCATCAACTTATAAACCTAGCACGACGCA
TGCAAATACGGAAGGCAGTCACGTCATCGGAATCGTAAAACCTTTCCATTATCCCAACCA
ATGTGAAAATATAACCACAGACACGTCAGTATGCGACGACGTTGAATGTTCAAAAACTAG
AAAAACTGACGACCCTTTAGAATTGAAATCGACGCTTAAAAACAACGATGTCTTGGATTG
CTCGACCAAGGATGCTCTTGGCGTTAAAATTGATAAATGTTTTTCCTTAGCGCCCCCGCT
GAATCAAAACTCGCCGTTGGATTTGTCGGTCTCAGTGAAAACGCAGTCGAACGCTGACCA
TCTTGCTCTAGACCTGACAAGAAAGGCACCAGTTCCGTTCGTTATTCCACAGAATAAATC
TCCTGTAACGTTTGCAAGTGCTTCAAACAAAACTCTTTTCAAGAACGGAGAGCAATTGTC
GTCAGAATACAACACTTCGAAAGGTGAACATACTTTAAAGTTAGACGACTTTAGTTCCCA
TATACGATTTTTTAACGTGGTTATTTTAAAAATAGGTAATCGACTAATTTCAGCAGTTGG
AACACATGTCCATAAAGGAGCAACAAACATCAAAGCAGAGAAACCGTTTGTCGTTGATAA
GAACAATAATACACAAGCTCCTCGTAAAGAGCTGTATAACATTGTCCGTCGTCGGGAAGA
ACGAATGTCAAATACTACACCCATCTCCACTCCAAACCACTGTTAAAGCTACAACAGTTT
GTATTTCCGACACTTCGCCACAATCCATGACGTCATTCGTGATGACGCAACTACGCAGCG
ATGCAGTGAAACTTTCGAAAGTAGTTGACGAAATTGGACGGCGGCATTTATCACCGAAAG
AAACAAACATAATAGATGTAGACGCTTTATTCGAAGATCTCCCAACGGTGCTACCACGAA
CGAATTCCCGAACCACAAACACATCTTTCAAACCGTTTAACGCGACTTCATCTGCAGCAC
CTACAGTTGGCTACCGACGTCGTTCGAACCCGGGATTCGTGTCCATACCCACAAGTTCTA
CAGCGCCCAGATTTTCCACGATAAGGCTGGATCAGACACGGGTTGCCCCATCTCACGCAC
GGGTTAGTCAATCGAACAGTGCACCGCCGGATCCCGTTTTAATCTCAGGAGTTTCTACAA
ACCGTGCCAGCATAACTAAGATATCTCGACCTCACAGCAACTCCTTTGACAACTCTAGGT
TTCAGCGAATGAGCATCACACCGCAACAAAGCCAACCTCAAATACGCCAACACAAGCCAC
TGCCAAGAACTGACCACTTTTACCAACCCACCGTGGGCCACATTGTCCTCGGGCCACCAC
GACCAGTAGTTCCTTCACATATGCAGCAAATGCCGCACATGCAGAATCAAGTACAACACG
AACAAAGCCAGCTCCAGCATCCCAAAAACCAACAGCAGCTTCCGTTTGTTCGTAACCAAT
ACGGAACTAACAGGCCATTCCAACAACAGCCACGTCATCAGCTCCCAATAAATCATCCAG
ACGCTGTAACTGAGCTCCGTAACATCAGCAGAGACAAAGACGGATTTCGCGTCCCTATAA
AACCTACGCCAGTTCACTCTGGTCGTTATTACGCACCAGCTATGGTGTTAAACTCGCCTT
CTGGTAGATACCCTGTAAGCCAACCGACGTATACCCAATCTCAAGTTCAGCAATCAGTGG
TGCAAGGCATCAGACCTGTGATCCCTCGATCGCCTTCAATCAGAGCCCCAACGGGCGGGG
TTTCTATCAATAGTTCGCCGATTCACCAGCAACCCAGGCATAGTTATAACCATCAATTAA
AGGAGAGCTACTTGTCAGTGAGGACACCGTTGGCACCCGGCGACGCGCAGCGTTACTCCG
CTCATTTGAAAGCGCAGCAAAACGAGCTCCATCACAAAATTGAAAGCTTGAAAGCATTGG
AACAAAAGATACAGACTGCCCCTGCTCTTAACGTTGTAAAACACACTCAAGCATCTCCAG
CAACGTCTCAAATATACCGGACGTCGTCAATAATGCAAACTGACTTTCGAAAACGCAAAA
TGAAACTCCCGGTCTCCTCCCCGAATCCGCTGTCAGAAAAGCTGCGTAAAATGACTCCGC
AAGGTGGCGCTAATGGGAATCAAGTAGCGACCGAGGAGAGCTGCACTGTTTGCAAAGAAA
GAGCTTATTTTGTTTGTTCTGGTTGCCATGGGGTTTGGTACTGTAGCAAATACTGTCAGT
TTCAAGATTGGTCGAGCCACAGTAAACGTTGTATATGAGTTGTGGTCAGTTCGGCTGGGA
GTTCACCGTTGTAGAACACCTGTATCATCAATCTTTCACTTTCTTTGGTCGACCACTCTT
GATTAAAAATCAATTTTCATTTTTTGAGTTCATTTTTTATTTATTTATTTTATTTTTTCT
GCTATGTTGGGTGAATAATCGATTTAATGTTTATTTGCATTTTATTTCAAGGTTTTCCTA
TGTTTTAAGTTCCCGCTTTTCAGACAGATATGTTCCAGATTTCATGTATATTTGGTCATT
GGTTCGAAACTAGTACAATTTGTGCCTTTCCTCTTTATCACTCTTGCTTCGAAAAATTCC
ACTGTTTATCGTGACAAAATTCTTCAACAGTTGGCGTGCTTGAATATTAAATACATGCGT
ATAAAGAAACCGTCGGCCACATACTCACGCGCCGCACCAGGTTTTACTGCCAACC

InterProScan

Pfam
Znf_MYND (IPR002893) - T[539-575] 1.2E-7
ProSiteProfiles
Znf_MYND (IPR002893) - T[539-575] 10.929
ProSitePatterns
Znf_MYND (IPR002893) - T[539-575] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value





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