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  1. Transcript 'KH2012:KH.C9.622.v2....'

Transcript Model

Transcript Id

KH2012:KH.C9.622.v2.R.SL3-1

Possible name(s)

DEAF1; RUNX1T1

Location

KhC9 [5,494,984 / 5,499,194]

Sequences

Amino acid sequence

Length: 576

>KH.C9.622.v2.R.SL3-1
FQQLEHMSIKEQQTSKQRNRLSLIRTIIHKLLVKSCITLSVVGKNECQILHPSPLQTTVK
ATTVCISDTSPQSMTSFVMTQLRSDAVKLSKVVDEIGRRHLSPKETNIIDVDALFEDLPT
VLPRTNSRTTNTSFKPFNATSSAAPTVGYRRRSNPGFVSIPTSSTAPRFSTIRLDQTRVA
PSHARVSQSNSAPPDPVLISGVSTNRASITKISRPHSNSFDNSRFQRMSITPQQSQPQIR
QHKPLPRTDHFYQPTVGHIVLGPPRPVVPSHMQQMPHMQNQVQHEQSQLQHPKNQQQLPF
VRNQYGTNRPFQQQPRHQLPINHPDAVTELRNISRDKDGFRVPIKPTPVHSGRYYAPAMV
LNSPSGRYPVSQPTYTQSQVQQSVVQGIRPVIPRSPSIRAPTGGVSINSSPIHQQPRHSY
NHQLKESYLSVRTPLAPGDAQRYSAHLKAQQNELHHKIESLKALEQKIQTAPALNVVKHT
QASPATSQIYRTSSIMQTDFRKRKMKLPVSSPNPLSEKLRKMTPQGGANGNQVATEESCT
VCKERAYFVCSGCHGVWYCSKYCQFQDWSSHSKRCI

Nucleotide sequence

Length: 3,176

>KH2012:KH.C9.622.v2.R.SL3-1
TGTTTGGAAAATAATAGTAACCAATGTAAAAATTGGCAAAAATTGTTTTATATTACGACT
AATTTTTCTGTATGACGTGCATAGCAAAGCAACAACTAGTGGTGGAGGAGAAGGAACAAA
CTGAACTACGGCTCGCCATGGAATTTCCGCGACATAATTGGCTCGTAAAACATTTAATGA
AAGAAAAACGAATAGAGAATGATGAAGCGGCTACTACTGAATCTGATTCGCCTACAGCAC
CCACCCATAAGAATACTGCCGCAAAATCTAGAACTTCGACTCCAAGAAGTAGCCCATCCC
CAAAAGAAGGTTCGCCACACCCAGAAAAGCAAGATACAGTAAATCTAAAAGAGACCCAAG
AAAACGAAGACGTAAGCATTGATGTCCCAGAGAAGCAAGTTGCCGCTGATCCTGCTAAAA
AAGCGGATGGTTCAAATCATATTGCAATTACGTCATCAACTTATAAACCTAGCACGACGC
ATGCAAATACGGAAGGCAGTCACGTCATCGGAATCGTAAAACCTTTCCATTATCCCAACC
AATGTGAAAATATAACCACAGACACGTCAGTATGCGACGACGTTGAATGTTCAAAAACTA
GAAAAACTGACGACCCTTTAGAATTGAAATCGACGCTTAAAAACAACGATGTCTTGGATT
GCTCGACCAAGGATGCTCTTGGCGTTAAAATTGATAAATGTTTTTCCTTAGCGCCCCCGC
TGAATCAAAACTCGCCGTTGGATTTGTCGGTCTCAGTGAAAACGCAGTCGAACGCTGACC
ATCTTGCTCTAGACCTGACAAGAAAGGCACCAGTTCCGTTCGTTATTCCACAGAATAAAT
CTCCTGTAACGTTTGCAAGTGCTTCAAACAAAACTCTTTTCAAGAACGGAGAGCAATTGT
CGTCAGAATACAACACTTCGAAAGGTGAACATACTTTAAAGTTAGACGACTTTAGTTCCC
ATATACGATTTTTTAACGTGGTTATTTTAAAAATAGGTAATCGACTAATTTCAGCAGTTG
GAACACATGTCCATAAAGGAGCAACAAACATCAAAGCAGAGAAACCGTTTGTCGTTGATA
AGAACAATAATACACAAGCTCCTCGTAAAGAGCTGTATAACATTGTCCGTCGTCGGGAAG
AACGAATGTCAAATACTACACCCATCTCCACTCCAAACCACTGTTAAAGCTACAACAGTT
TGTATTTCCGACACTTCGCCACAATCCATGACGTCATTCGTGATGACGCAACTACGCAGC
GATGCAGTGAAACTTTCGAAAGTAGTTGACGAAATTGGACGGCGGCATTTATCACCGAAA
GAAACAAACATAATAGATGTAGACGCTTTATTCGAAGATCTCCCAACGGTGCTACCACGA
ACGAATTCCCGAACCACAAACACATCTTTCAAACCGTTTAACGCGACTTCATCTGCAGCA
CCTACAGTTGGCTACCGACGTCGTTCGAACCCGGGATTCGTGTCCATACCCACAAGTTCT
ACAGCGCCCAGATTTTCCACGATAAGGCTGGATCAGACACGGGTTGCCCCATCTCACGCA
CGGGTTAGTCAATCGAACAGTGCACCGCCGGATCCCGTTTTAATCTCAGGAGTTTCTACA
AACCGTGCCAGCATAACTAAGATATCTCGACCTCACAGCAACTCCTTTGACAACTCTAGG
TTTCAGCGAATGAGCATCACACCGCAACAAAGCCAACCTCAAATACGCCAACACAAGCCA
CTGCCAAGAACTGACCACTTTTACCAACCCACCGTGGGCCACATTGTCCTCGGGCCACCA
CGACCAGTAGTTCCTTCACATATGCAGCAAATGCCGCACATGCAGAATCAAGTACAACAC
GAACAAAGCCAGCTCCAGCATCCCAAAAACCAACAGCAGCTTCCGTTTGTTCGTAACCAA
TACGGAACTAACAGGCCATTCCAACAACAGCCACGTCATCAGCTCCCAATAAATCATCCA
GACGCTGTAACTGAGCTCCGTAACATCAGCAGAGACAAAGACGGATTTCGCGTCCCTATA
AAACCTACGCCAGTTCACTCTGGTCGTTATTACGCACCAGCTATGGTGTTAAACTCGCCT
TCTGGTAGATACCCTGTAAGCCAACCGACGTATACCCAATCTCAAGTTCAGCAATCAGTG
GTGCAAGGCATCAGACCTGTGATCCCTCGATCGCCTTCAATCAGAGCCCCAACGGGCGGG
GTTTCTATCAATAGTTCGCCGATTCACCAGCAACCCAGGCATAGTTATAACCATCAATTA
AAGGAGAGCTACTTGTCAGTGAGGACACCGTTGGCACCCGGCGACGCGCAGCGTTACTCC
GCTCATTTGAAAGCGCAGCAAAACGAGCTCCATCACAAAATTGAAAGCTTGAAAGCATTG
GAACAAAAGATACAGACTGCCCCTGCTCTTAACGTTGTAAAACACACTCAAGCATCTCCA
GCAACGTCTCAAATATACCGGACGTCGTCAATAATGCAAACTGACTTTCGAAAACGCAAA
ATGAAACTCCCGGTCTCCTCCCCGAATCCGCTGTCAGAAAAGCTGCGTAAAATGACTCCG
CAAGGTGGCGCTAATGGGAATCAAGTAGCGACCGAGGAGAGCTGCACTGTTTGCAAAGAA
AGAGCTTATTTTGTTTGTTCTGGTTGCCATGGGGTTTGGTACTGTAGCAAATACTGTCAG
TTTCAAGATTGGTCGAGCCACAGTAAACGTTGTATATGAGTTGTGGTCAGTTCGGCTGGG
AGTTCACCGTTGTAGAACACCTGTATCATCAATCTTTCACTTTCTTTGGTCGACCACTCT
TGATTAAAAATCAATTTTCATTTTTTGAGTTCATTTTTTATTTATTTATTTTATTTTTTC
TGCTATGTTGGGTGAATAATCGATTTAATGTTTATTTGCATTTTATTTCAAGGTTTTCCT
ATGTTTTAAGTTCCCGCTTTTCAGACAGATATGTTCCAGATTTCATGTATATTTGGTCAT
TGGTTCGAAACTAGTACAATTTGTGCCTTTCCTCTTTATCACTCTTGCTTCGAAAAATTC
CACTGTTTATCGTGACAAAATTCTTCAACAGTTGGCGTGCTTGAATATTAAATACATGCG
TATAAAGAAACCGTCGGCCACATACTCACGCGCCGCACCAGGTTTTACTGCCAACC

InterProScan

Pfam
Znf_MYND (IPR002893) - T[539-575] 1.2E-7
ProSiteProfiles
Znf_MYND (IPR002893) - T[539-575] 10.929
ProSitePatterns
Znf_MYND (IPR002893) - T[539-575] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value