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- Transcript 'KH2012:KH.C9.717.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.717.v1.A.ND1-1
Possible name(s)
FOXF1; FOXH1; FOXQ1
Gene model
Location
KhC9 [3,568,217 / 3,572,355]
Amino acid sequence
Length: 432
>KH.C9.717.v1.A.ND1-1
FGKRKWPKAYRRYEKPPYSYVGLIALAIQNSTTKMLKLSDILLRISTMFPFFKGEYQGWR
DSVRHNLSQNKCFKKVLPDPSRPHSKGNYWTVDIASIPPEKLKRQNTSVSRNVAPGFTYA
KHLTDIFDLESGKLKSMVSKVDVCNFHDDQHSLADNLISTIHKDVAGNSAVESSCSINEE
VTGEVYTVPHHIPSSSNILDEHGVVCWKSHSQKCMNDKRRFEKVQADSSNHSDNRTATIG
HQFNEISHKPYETPHEQNKTPFPGSTGLDASNGLTLFSLVNSLKETDSLIAPNKKPFFKQ
PPSILPSMLHPTAKPILLSSTDQTVGPEGPPNITWTSSNALPICYGYFPAPHDVNLLHNK
GQDSTSGTPRHHGPYRDQTEFLLDQASILANYSSNTNQISDQFNKSALPMDGLLQVPNQY
TATRSDYLTMYR
Nucleotide sequence
Length: 1,714
>KH2012:KH.C9.717.v1.A.ND1-1
CTCCAATGAGAGTAGTTAACTCGGTTAATCTTCGATTAAAGTGAGGAAAGAGGGCAGTGG
TGGCGATAATTATCGCTTTGCTAATTGCCGCCTTTTTCAATCCAACATGCTGTCCATGTT
TTAGAAGTCGTTTTTTTTACCAACGATCAAGTCGCAGTTTTGTAGGAATAAGATATAGCA
GCGGTTCATTTATGAGCATTATTGGAGGTATGAAATCTAACAGTTTAATATCGATGTCAA
TTCAAGTGCAGTAAAACAAAAAGATTAAAAGGATCTACAAGAATTCACCCATGGAGACAA
ATGACTCGACAACAATTAGTTCGGGAAACGAAAATGGCCGAAGGCATATCGCAGATACGA
GAAACCGCCATATTCGTATGTTGGACTGATCGCTCTCGCAATTCAAAACTCTACAACTAA
AATGCTTAAACTGTCTGACATTCTTTTACGCATAAGTACGATGTTTCCATTTTTTAAGGG
AGAATATCAAGGTTGGAGAGATTCCGTGCGACACAATCTTTCTCAAAATAAATGTTTTAA
AAAGGTTTTACCCGATCCATCCCGACCCCATTCCAAAGGAAACTATTGGACAGTTGATAT
CGCTTCAATACCACCGGAAAAATTAAAGCGACAAAATACCTCGGTTTCGCGGAACGTAGC
TCCTGGATTTACATATGCGAAGCACCTGACAGATATATTTGACTTGGAGAGCGGAAAACT
TAAATCCATGGTGAGCAAAGTTGACGTTTGTAATTTCCATGATGATCAACATTCTTTGGC
AGACAATCTTATATCAACCATACATAAAGATGTTGCAGGAAACTCAGCCGTTGAGAGTTC
GTGTTCGATAAACGAAGAAGTCACAGGTGAAGTTTACACTGTACCGCATCATATACCATC
GTCCTCCAATATATTAGATGAGCACGGCGTTGTATGTTGGAAGTCTCATTCACAAAAGTG
CATGAATGACAAGAGAAGATTTGAAAAAGTTCAAGCCGACAGCAGCAATCATAGTGACAA
CCGAACGGCAACCATTGGTCATCAATTCAATGAAATTTCTCATAAACCATACGAAACACC
ACATGAACAAAATAAAACACCTTTTCCTGGTTCCACCGGTTTAGACGCATCAAACGGGTT
AACTCTATTTTCTTTGGTAAATTCTTTGAAGGAAACCGATTCACTAATTGCACCAAACAA
GAAACCGTTTTTTAAACAGCCGCCATCAATTTTACCATCCATGTTACACCCAACTGCAAA
ACCCATCTTATTATCAAGTACTGATCAAACAGTTGGGCCAGAAGGTCCGCCGAATATAAC
ATGGACGTCCTCGAACGCACTGCCGATATGTTACGGTTATTTCCCAGCGCCACATGATGT
CAACTTACTTCACAACAAAGGACAGGATTCAACAAGTGGTACTCCTCGGCATCATGGTCC
ATACAGAGACCAAACTGAGTTCTTGTTGGACCAGGCATCTATTTTGGCCAACTACAGTTC
AAACACGAATCAGATTAGCGACCAGTTTAATAAATCAGCTCTGCCGATGGATGGTTTATT
GCAGGTTCCAAACCAATATACCGCGACAAGATCTGATTATTTAACAATGTATAGATAGTT
GTTGTTTAGTGTATTTTGACAGCAAATGAGTTGAATTTATTTGCGAAACAAATATATTTT
AATAAAGATTTTGAGACATTAGTCGATATGAAAA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[4-112] 5.6E-28 |
| SMART |
Fork_head_dom (IPR001766) - T[13-103] 3.1E-36 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[14-96] 8.16E-28 |
| Pfam |
Fork_head_dom (IPR001766) - T[15-95] 1.6E-25 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[15-93] 27.012 |
| CDD |
Fork_head_dom (IPR001766) - T[15-93] 5.49473E-34 |
| PRINTS |
Fork_head_dom (IPR001766) - T[15-28] 1.2E-14 - T[36-53] 1.2E-14 - T[59-76] 1.2E-14 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[15-28] . |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[59-65] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXF1_HUMAN | 55.914 % | 109 | 1.45E-26 |
| FOXH1_HUMAN | 45.968 % | 134 | 2.31E-35 |
| FOXQ1_HUMAN | 56.977 % | 107 | 1.05E-25 |