Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C9.73.v1.A.nonSL6-1

Possible name(s)

RPL12

Gene model

KH2012:KH.C9.73

Location

KhC9 [5,148,737 / 5,150,533]

Sequences

Amino acid sequence

Length: 132

>KH.C9.73.v1.A.nonSL6-1
TVIMPPKFDPTAIHYVYLRVTGGEVGATASLAPKIGPLGLSPKKVGDDIAKSTQDWKGLK
ITVCLKIQNRQATVSVVPSAASLVIKALKEPPRDKKKSNIMVTLPWRMFMALHVLCENVQ
CRVSSLAQSRKF

Nucleotide sequence

Length: 555

>KH2012:KH.C9.73.v1.A.nonSL6-1
ACTGTTATCATGCCTCCCAAGTTCGATCCAACCGCTATTCACTACGTGTACCTCCGAGTT
ACCGGTGGGGAAGTTGGTGCGACCGCTTCGCTTGCTCCTAAAATCGGACCACTCGGTCTC
AGTCCCAAGAAAGTAGGAGATGACATTGCCAAGTCAACCCAAGACTGGAAGGGATTGAAA
ATTACTGTGTGTTTGAAGATCCAAAACAGACAAGCCACCGTGTCTGTTGTCCCGAGTGCG
GCATCTTTGGTGATCAAAGCCTTGAAGGAACCACCACGTGATAAGAAGAAGTCAAACATA
ATGGTAACATTACCATGGAGGATGTTTATGGCGTTGCACGTATTATGCGAGAACGTTCAA
TGTCGCGTTTCTTCTCTGGCACAGTCAAGGAAATTTTAGGAACTGCCCAGAGCGTTGGTT
GCACTGTAGATGGTAAACCCCCCCATGATGTCATCGACATGATCAACGACGGTGAAATTG
AATGCCCCGATGAGTAGGTCAACTGATAAGCGCAAGGGTAAGAAATGTTAAAAATAAAAA
AGTTTCGCAAAAAAA

InterProScan

SUPERFAMILY	Ribosomal_L11/L12_N_sf (IPR036796) - T[3-89] 5.76E-31
PANTHER	Ribosomal_L11/L12 (IPR000911) - T[4-98] 3.2E-45
Gene3D	Ribosomal_L11_C_sf (IPR036769) - T[4-105] 1.8E-44
SMART	Ribosomal_L11/L12 (IPR000911) - T[16-124] 5.2E-15
Pfam	Ribosomal_L11_N (IPR020784) - T[16-72] 7.0E-23

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RL12_HUMAN	79.787 %	157	1.48E-50