Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C9.73.v4.A.nonSL13-1

Possible name(s)

RPL12

Gene model

KH2012:KH.C9.73

Location

KhC9 [5,148,737 / 5,150,590]

Sequences

Amino acid sequence

Length: 174

>KH.C9.73.v4.A.nonSL13-1
RERLISTVIMPPKFDPTAIHYVYLRVTGGEVGATASLAPKIGPLGLSPKKVGDDIAKSTQ
DWKGLKITVCLKIQNRQATVSVVPSAASLVIKALKEPPRDKKKVKNIKHNGNITMEDVYG
VARIMRERSMSRFFSGTVKEILGTAQSVGCTVDGKPPHDVIDMINDGEIECPDE

Nucleotide sequence

Length: 622

>KH2012:KH.C9.73.v4.A.nonSL13-1
AAATTTGGTTTGGTCGGTCCTTTCTAAAAAGTCGTGTAACGGGAAAGACTAATATCTACT
GTTATCATGCCTCCCAAGTTCGATCCAACCGCTATTCACTACGTGTACCTCCGAGTTACC
GGTGGGGAAGTTGGTGCGACCGCTTCGCTTGCTCCTAAAATCGGACCACTCGGTCTCAGT
CCCAAGAAAGTAGGAGATGACATTGCCAAGTCAACCCAAGACTGGAAGGGATTGAAAATT
ACTGTGTGTTTGAAGATCCAAAACAGACAAGCCACCGTGTCTGTTGTCCCGAGTGCGGCA
TCTTTGGTGATCAAAGCCTTGAAGGAACCACCACGTGATAAGAAGAAGGTTAAGAACATC
AAACATAATGGTAACATTACCATGGAGGATGTTTATGGCGTTGCACGTATTATGCGAGAA
CGTTCAATGTCGCGTTTCTTCTCTGGCACAGTCAAGGAAATTTTAGGAACTGCCCAGAGC
GTTGGTTGCACTGTAGATGGTAAACCCCCCCATGATGTCATCGACATGATCAACGACGGT
GAAATTGAATGCCCCGATGAGTAGGTCAACTGATAAGCGCAAGGGTAAGAAATGTTAAAA
ATAAAAAAGTTTCGCAAAAAAA

InterProScan

Gene3D	Ribosomal_L11/L12_N_sf (IPR036796) - T[5-89] 4.2E-43
SUPERFAMILY	Ribosomal_L11/L12_N_sf (IPR036796) - T[9-95] 9.42E-31
PANTHER	Ribosomal_L11/L12 (IPR000911) - T[10-173] 2.9E-83
Hamap	Ribosomal_L11/L12 (IPR000911) - T[18-154] 14.229
SMART	Ribosomal_L11/L12 (IPR000911) - T[22-153] 7.9E-54
Pfam	Ribosomal_L11_N (IPR020784) - T[22-78] 1.3E-22
CDD	Ribosomal_L11/L12 (IPR000911) - T[22-152] 3.48922E-49
Pfam	Ribosomal_L11_C (IPR020783) - T[83-152] 2.9E-17
SUPERFAMILY	Ribosomal_L11_C_sf (IPR036769) - T[84-157] 2.75E-17
Gene3D	Ribosomal_L11_C_sf (IPR036769) - T[90-172] 1.2E-40
ProSitePatterns	Ribosomal_L11_CS (IPR020785) - T[139-154] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RL12_HUMAN	73.62 %	256	1.12E-88