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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S7...' > 
  2. Transcript 'KH2012:KH.C11.112.v3...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  4. Molecular Tool 'Lhx3b-ATG MO (Christiaen 2009)' > 
  5. Transcript 'KH2012:KH.C9.73.v5.A...'

Transcript Model

Transcript Id

KH2012:KH.C9.73.v5.A.nonSL19-2

Possible name(s)

RPL12

Gene model

KH2012:KH.C9.73

Location

KhC9 [5,148,858 / 5,150,540]

Sequences

Amino acid sequence

Length: 172

>KH.C9.73.v5.A.nonSL19-2
ISTVIMPPKFDPTAIHYVYLRVTGGEVGATASLAPKIGPLGLSPKKVGDDIAKSTQDWKG
LKITVCLKIQNRQATVSVVPSAASLVIKALKEPPRDKKKVKNIKHNGNITMEDVYGVARI
MRERSMSRFFSGTVKEILGTAQSVGCTVDGKPPHDVIDMINDGEIECPDVRT

Nucleotide sequence

Length: 676

>KH2012:KH.C9.73.v5.A.nonSL19-2
AATATCTACTGTTATCATGCCTCCCAAGTTCGATCCAACCGCTATTCACTACGTGTACCT
CCGAGTTACCGGTGGGGAAGTTGGTGCGACCGCTTCGCTTGCTCCTAAAATCGGACCACT
CGGTCTCAGTCCCAAGAAAGTAGGAGATGACATTGCCAAGTCAACCCAAGACTGGAAGGG
ATTGAAAATTACTGTGTGTTTGAAGATCCAAAACAGACAAGCCACCGTGTCTGTTGTCCC
GAGTGCGGCATCTTTGGTGATCAAAGCCTTGAAGGAACCACCACGTGATAAGAAGAAGGT
TAAGAACATCAAACATAATGGTAACATTACCATGGAGGATGTTTATGGCGTTGCACGTAT
TATGCGAGAACGTTCAATGTCGCGTTTCTTCTCTGGCACAGTCAAGGAAATTTTAGGAAC
TGCCCAGAGCGTTGGTTGCACTGTAGATGGTAAACCCCCCCATGATGTCATCGACATGAT
CAACGACGGTGAAATTGAATGCCCCGATGTAAGGACATAATATTAGTAGATGAAATAGTA
AAAAATCTTTTAACCTTTTTTCTGGTATGAATTTGGAACACAAACTATTTGCTATACTGT
TAGATCAAATGGGCCATGCACATTTTGTGCTATATTCAACTATATACCTAACTGCTGATT
TTGTTGGTGTGATGCT

InterProScan

Gene3D
Ribosomal_L11/L12_N_sf (IPR036796) - T[1-85] 4.1E-43
SUPERFAMILY
Ribosomal_L11/L12_N_sf (IPR036796) - T[5-91] 9.94E-31
PANTHER
Ribosomal_L11/L12 (IPR000911) - T[6-168] 4.0E-83
Hamap
Ribosomal_L11/L12 (IPR000911) - T[14-150] 14.229
Pfam
Ribosomal_L11_N (IPR020784) - T[18-74] 1.3E-22
SMART
Ribosomal_L11/L12 (IPR000911) - T[18-149] 7.9E-54
CDD
Ribosomal_L11/L12 (IPR000911) - T[18-148] 9.46547E-49
Pfam
Ribosomal_L11_C (IPR020783) - T[79-148] 2.9E-17
SUPERFAMILY
Ribosomal_L11_C_sf (IPR036769) - T[80-153] 2.62E-17
Gene3D
Ribosomal_L11_C_sf (IPR036769) - T[86-168] 1.2E-40
ProSitePatterns
Ribosomal_L11_CS (IPR020785) - T[135-150] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL12_HUMAN 73.62 % 256 8.76E-89