Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C9.73.v5.A.nonSL3-2

Possible name(s)

RPL12

Gene model

KH2012:KH.C9.73

Location

KhC9 [5,148,858 / 5,150,557]

Sequences

Amino acid sequence

Length: 176

>KH.C9.73.v5.A.nonSL3-2
RERLISTVIMPPKFDPTAIHYVYLRVTGGEVGATASLAPKIGPLGLSPKKVGDDIAKSTQ
DWKGLKITVCLKIQNRQATVSVVPSAASLVIKALKEPPRDKKKVKNIKHNGNITMEDVYG
VARIMRERSMSRFFSGTVKEILGTAQSVGCTVDGKPPHDVIDMINDGEIECPDVRT

Nucleotide sequence

Length: 693

>KH2012:KH.C9.73.v5.A.nonSL3-2
GTGTAACGGGAAAGACTAATATCTACTGTTATCATGCCTCCCAAGTTCGATCCAACCGCT
ATTCACTACGTGTACCTCCGAGTTACCGGTGGGGAAGTTGGTGCGACCGCTTCGCTTGCT
CCTAAAATCGGACCACTCGGTCTCAGTCCCAAGAAAGTAGGAGATGACATTGCCAAGTCA
ACCCAAGACTGGAAGGGATTGAAAATTACTGTGTGTTTGAAGATCCAAAACAGACAAGCC
ACCGTGTCTGTTGTCCCGAGTGCGGCATCTTTGGTGATCAAAGCCTTGAAGGAACCACCA
CGTGATAAGAAGAAGGTTAAGAACATCAAACATAATGGTAACATTACCATGGAGGATGTT
TATGGCGTTGCACGTATTATGCGAGAACGTTCAATGTCGCGTTTCTTCTCTGGCACAGTC
AAGGAAATTTTAGGAACTGCCCAGAGCGTTGGTTGCACTGTAGATGGTAAACCCCCCCAT
GATGTCATCGACATGATCAACGACGGTGAAATTGAATGCCCCGATGTAAGGACATAATAT
TAGTAGATGAAATAGTAAAAAATCTTTTAACCTTTTTTCTGGTATGAATTTGGAACACAA
ACTATTTGCTATACTGTTAGATCAAATGGGCCATGCACATTTTGTGCTATATTCAACTAT
ATACCTAACTGCTGATTTTGTTGGTGTGATGCT

InterProScan

Gene3D	Ribosomal_L11/L12_N_sf (IPR036796) - T[5-89] 4.4E-43
SUPERFAMILY	Ribosomal_L11/L12_N_sf (IPR036796) - T[9-95] 9.81E-31
PANTHER	Ribosomal_L11/L12 (IPR000911) - T[10-172] 4.4E-83
Hamap	Ribosomal_L11/L12 (IPR000911) - T[18-154] 14.229
Pfam	Ribosomal_L11_N (IPR020784) - T[22-78] 1.3E-22
SMART	Ribosomal_L11/L12 (IPR000911) - T[22-153] 7.9E-54
CDD	Ribosomal_L11/L12 (IPR000911) - T[22-152] 4.09245E-49
Pfam	Ribosomal_L11_C (IPR020783) - T[83-152] 3.0E-17
SUPERFAMILY	Ribosomal_L11_C_sf (IPR036769) - T[84-157] 2.75E-17
Gene3D	Ribosomal_L11_C_sf (IPR036769) - T[90-172] 1.2E-40
ProSitePatterns	Ribosomal_L11_CS (IPR020785) - T[139-154] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RL12_HUMAN	73.62 %	256	1.32E-88