- Transcript 'Boleac.CG.SB_v3.S427...' >
- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'KH2012:KH.C12.696.v1...' >
- Transcript 'Boleac.CG.SB_v3.S500...' >
- Transcript 'KH2012:KH.C9.785.v2....'
Transcript Model
Transcript Id
KH2012:KH.C9.785.v2.A.SL1-1
Possible name(s)
DES; GFAP; VIM
Gene model
Location
KhC9 [401,641 / 409,660]
Amino acid sequence
Length: 483
>KH.C9.785.v2.A.SL1-1
DNLKMAQRSSRKTTEERSSSYKRHFGEGPARFTYSSKSSPGRSQSATRSYRYSSSSGGGG
GAAMAGGAMGGGMGMGAGMGMGGGMGASMGGERIRMTRAAPVSSGISMRDINLMSDALGP
DFERMRINEKEELQVLNTRFAGYIQKVRALEQANKILEVQLEQLSAQQPGRVADMYEDEL
ARLRREVDQITKEKANILMQLENAALEANNWKDKYEEEAISKRELEDDLNSMRKDCDDAT
LVRLDLERRLETLQEEIEFLKRTHDQEVAELMEQVRKTEVKIEMAPGPDLEELVEDMRKQ
YEKLASKNRADAEEWYTEKVSTLQDQAVKNDDLVRNVRSELSEYRKSVQTLNMEIDSLRG
TNDSLQRAMGELEERYNRDTSDYQDTIMNLQAECDDLKTQMAQHLRQYQELMDVKMALDI
EIATYRKLLEGEESRLAERLRTSGGGSSRFVTTTSRSGKIKITIQEDFHPAEEEQVTSWE
VMT
Nucleotide sequence
Length: 2,060
>KH2012:KH.C9.785.v2.A.SL1-1
GTATACAGGAAAAAATAATTTGCTAAAGTTTTTGAATATTGTCCGTATAATAGTTGATGT
CTGTAAATATAACTAAGTTAATAAAAATTTAAACCAAATTAAGATAACCTCAAGATGGCG
CAAAGGAGCAGCAGAAAAACGACAGAAGAACGTAGCTCAAGCTACAAACGACACTTTGGT
GAAGGCCCGGCCAGATTCACTTATTCAAGCAAGTCATCTCCCGGCCGATCCCAGTCCGCA
ACACGATCGTACAGGTACTCAAGCAGCAGCGGTGGCGGTGGCGGAGCTGCTATGGCCGGT
GGTGCCATGGGCGGCGGTATGGGCATGGGTGCTGGCATGGGCATGGGAGGAGGCATGGGC
GCTTCTATGGGTGGCGAAAGGATCAGAATGACCCGAGCAGCACCAGTGAGCAGTGGAATC
TCAATGCGAGACATCAACTTAATGTCGGATGCTCTGGGACCAGATTTCGAGAGGATGAGG
ATCAACGAAAAAGAAGAACTCCAAGTCCTTAATACCAGATTCGCTGGTTACATCCAAAAG
GTTCGAGCACTTGAACAAGCCAACAAGATCTTGGAAGTTCAACTTGAACAACTAAGCGCC
CAACAACCCGGTCGTGTTGCTGATATGTACGAAGATGAATTGGCAAGACTCCGTCGAGAA
GTCGACCAGATCACCAAGGAAAAGGCGAACATCCTGATGCAGTTGGAAAACGCAGCATTG
GAAGCAAACAATTGGAAAGACAAATACGAAGAAGAAGCAATCAGCAAACGAGAACTCGAA
GACGATCTCAACTCCATGCGAAAAGATTGCGATGACGCAACTTTGGTTCGTCTTGACCTT
GAACGCAGACTGGAAACACTGCAAGAAGAAATTGAGTTCCTTAAGAGAACTCATGACCAG
GAAGTTGCTGAGCTCATGGAACAAGTCAGGAAGACGGAGGTAAAGATCGAGATGGCTCCC
GGACCTGATCTGGAGGAACTCGTTGAAGACATGAGGAAACAATACGAGAAACTCGCATCC
AAGAACCGAGCTGATGCTGAGGAATGGTACACTGAGAAGGTATCCACCCTCCAAGACCAA
GCCGTCAAGAACGACGACCTAGTACGTAACGTTCGAAGTGAATTGAGCGAATACAGGAAG
AGCGTCCAGACCTTGAATATGGAGATTGACTCATTGAGAGGAACAAACGACTCCCTTCAA
CGAGCAATGGGAGAACTTGAAGAGAGGTACAACAGAGATACCTCCGACTACCAAGACACC
ATTATGAACTTACAGGCTGAATGCGACGACCTGAAGACACAGATGGCACAACATCTCCGT
CAATACCAAGAACTCATGGACGTCAAGATGGCTTTGGACATCGAGATCGCTACTTACAGG
AAGCTGTTGGAAGGAGAGGAATCAAGGCTTGCTGAACGCCTACGAACCTCGGGCGGCGGT
AGCTCCCGTTTCGTCACAACCACATCAAGATCAGGTAAGATTAAAATAACCATCCAGGAG
GATTTTCATCCGGCCGAGGAGGAGCAAGTGACGTCATGGGAAGTGATGACGTAGAAACCG
TCACAACAAAAAAAGTTGTTGTCAAGACAATTGAAACAAAGGACGGAAAGGTCGTGAGCC
AAACCGAGGACGTTCGTGAGCAATCATCTGGTGATCATGATGACAACGCTCACGCCACCT
TGTGAGCAACAATGGCTGTTATTTAAAAAAGTTTATAATCGTTACGTAATCAATTCAATT
AAAAAAAGTTTATAATCCCCAGTTATTACGTAATAAAGCCGTTTGTTTGGATTTCGCGTG
TACCAAGTATGACGTAATCGCTTTGTTTGTGACGTTGTGACGTGTGATCTAACAGATCTG
TATTGTTGACAAAGGTTGCTGCTGTGACGTAATGTGTGACGTCAAATACATGGAAGCTTG
GTTTATGAGATAATAGGTGTGGTTTGTGACGTAACAATGGTATAGAGATGACATTACTAT
CGTACATAACGTCATAATGCGAATGTACACGTAATAAACGGAATGTTTATTCGTCATAAT
AAACTTTGTTTGTTCAATAA
| PANTHER |
IF (IPR001664) - T[56-457] 9.8E-151 |
| SMART |
IF (IPR001664) - T[128-435] 7.9E-138 |
| Pfam |
IF (IPR001664) - T[128-435] 1.5E-100 |
| PRINTS |
Keratin_I (IPR002957) - T[204-217] 3.5E-17 - T[225-248] 3.5E-17 - T[278-298] 3.5E-17 - T[350-365] 3.5E-17 - T[376-402] 3.5E-17 |
| ProSitePatterns |
Intermediate_filament_CS (IPR018039) - T[422-430] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VIME_HUMAN | 43.645 % | 327 | 1.77E-107 |
| GFAP_HUMAN | 39.855 % | 294 | 3.61E-95 |
| DESM_HUMAN | 40.87 % | 278 | 1.34E-88 |