- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C9.791.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.791.v1.A.SL2-1
Possible name(s)
ITGA11; ITGA2; ITGAM
Gene model
Location
KhC9 [3,381,536 / 3,396,556]
Amino acid sequence
Length: 1,271
>KH.C9.791.v1.A.SL2-1
EMNYWKLILLIAVGTFSFIEWGASQNVETRNHVRIHTVRTGSNVNQFGTSLLNRKSVSST
EFFIGAPGFTSNAARSGNIREGAVYKCNVPDNALGDVQCTDASRIPGIGENGALGMAMTM
TSARDSVVMCSPQYMFSCPNAAVSQRQIGSCVKYDTSSTLITKLDSPCPTVCPQGSSLIV
DIIILLDGSTSVFPSNFELGKSWIKNLLQSFSSDIDKHNVVVGLYSFSNIIKREIPLSAR
TYSTLSGMIDAVRYPYGQTFIHTAINEAVQEYQRAGRASVPKLLIVITDGEATVPSAVAP
SANAARAAGIILTAVGIGSSVNENELTTIAGAAERVFRVSDFSSLGSILAPLQKVITDSG
SSSIEGSGKNTTTELTQCQIGLAAHVSKKSNLYVGGVGSYDRAGTVFDFVGSSGIPTSFT
GSINVDELKTTFEPETIQSLKDSYMGYSVTSGNFFGTSNAEYIATGVPKYHSKGTVVVSK
SNTPITSQSQVHSVHPYGSLWQLGSYFGQSVRGIDLNKDSYDDLVVSAPLYNEVNGYDQG
RVFIFMNNLQNPVLAWLNETYQPRVLSGTKASGARFGMSIASAGDLDQNGYEDIIIGAPY
EESTSTSSGVVYVYYNSQLGLNEINRQRIPGTTLKSSIQQFGYSVLGGTAIPVDIDNNHY
PDVVVGAPRSDSVFLLKSRPIVDVQATIELIPPVFDVINCLADVTACSTVKICIKAKFRR
EHAPATLAMDLSTVLDSKIFDSQSKRITFFGKTTSVETKTLSVTSTYTCFVYSVKLNTNA
LGTSAGALEISPTISFSYDFTAAHKQAVLSGIIDPLKEKKISADWTFNKSCSGTNGKCVH
DLSVSATYSIRTDNSVLVLGANPGILSVGITIRNNGPDNAFFTRLNITSGSLAFSKTTGS
CIRTVSSDVVSGILVLSYQRTASVLGDMMLANTMCQFTVEYSLDSLTSKATSKQLQLNGI
IYSNAGGVAVASDPNLQNNKFELKRTVQYSSAVSVSGQSNPDYLFYERSTEPKVAYTLTD
AVLGGNRTNIVHTHMIENGGPLRVAKLLTTFTWPEATKAGLPLLYIYDIQCLPASKCTCD
TANKINSLGLHVNISRTTPIDLTFPEATTILPSIVNCAGVICKSISCSISQLEPFKSVTL
TASFKLWLPSLNNKLLVTNLRSLLNVNVENEPIYPNANLLSTVSTTVSVKLPVATGQGNN
AVNLGAIIGGILGGIALLCIMIAVMWKAGFFKSKYGEMKRDAMRSSLRDANGDLGRSTDD
LVDSPYELAIN
Nucleotide sequence
Length: 3,994
>KH2012:KH.C9.791.v1.A.SL2-1
GAAATGAATTATTGGAAATTAATATTACTGATTGCTGTTGGGACGTTCTCCTTTATAGAG
TGGGGTGCTTCGCAAAACGTGGAAACTAGAAATCACGTCAGGATACATACTGTGAGAACT
GGGTCGAATGTGAACCAGTTTGGGACTTCTTTATTGAACCGAAAATCAGTCAGCTCCACA
GAATTTTTCATCGGGGCGCCTGGTTTTACTTCCAATGCTGCGAGGTCTGGTAACATAAGA
GAAGGAGCGGTTTATAAATGCAATGTTCCTGATAATGCTTTGGGCGACGTACAATGTACG
GACGCAAGCAGAATTCCAGGAATAGGTGAAAACGGAGCACTTGGTATGGCGATGACAATG
ACCAGCGCGAGAGACAGCGTTGTTATGTGCAGTCCGCAATACATGTTTTCCTGCCCCAAC
GCCGCTGTATCGCAAAGACAAATCGGCTCGTGTGTAAAATACGACACAAGCAGTACTCTT
ATAACCAAGTTAGATTCACCATGTCCGACTGTTTGTCCGCAAGGAAGTTCCCTTATCGTC
GATATCATTATTTTACTGGACGGTTCAACCAGTGTATTCCCGTCCAACTTTGAACTTGGA
AAGAGTTGGATTAAAAATCTTTTACAATCTTTTAGCTCGGATATTGATAAGCATAATGTT
GTGGTTGGCCTGTACTCATTCAGCAACATTATTAAACGTGAAATCCCATTATCTGCTCGC
ACATACTCAACACTTTCAGGTATGATTGATGCTGTTCGTTACCCTTATGGACAAACATTT
ATACACACCGCAATCAACGAGGCCGTACAGGAATACCAACGAGCAGGCAGAGCATCGGTG
CCGAAACTTCTCATAGTTATAACTGATGGAGAAGCTACCGTACCATCGGCCGTCGCACCG
TCCGCTAACGCAGCAAGAGCTGCTGGTATAATTCTCACTGCCGTTGGAATTGGAAGCTCG
GTAAATGAAAACGAACTCACAACAATAGCTGGAGCTGCCGAGAGAGTTTTTCGTGTTAGC
GATTTTTCTAGCTTGGGAAGCATTCTGGCTCCATTGCAAAAAGTTATTACAGATTCCGGT
TCTTCCTCTATTGAAGGTTCGGGTAAAAACACCACAACCGAACTAACGCAATGTCAGATT
GGTCTCGCCGCTCACGTTTCCAAGAAAAGTAACTTATACGTTGGGGGGGTTGGGTCGTAC
GATAGAGCCGGTACAGTATTCGACTTTGTCGGCTCTTCTGGTATTCCTACAAGCTTCACA
GGATCCATAAATGTAGACGAACTCAAAACTACATTTGAACCTGAAACAATTCAATCGTTA
AAAGATTCTTACATGGGTTATTCGGTAACGAGTGGAAACTTTTTCGGAACTTCGAACGCA
GAGTATATAGCTACAGGGGTGCCCAAGTACCATTCAAAAGGAACAGTTGTAGTGTCTAAA
TCCAACACACCGATCACGTCCCAAAGTCAAGTGCATTCAGTACACCCATATGGTTCATTA
TGGCAACTTGGGTCATATTTTGGGCAAAGTGTTCGCGGTATCGACCTTAACAAAGATTCC
TATGATGACCTAGTTGTATCTGCACCATTGTACAACGAAGTTAACGGCTACGATCAAGGG
CGTGTATTTATTTTTATGAACAACCTACAAAATCCAGTTCTTGCTTGGTTAAACGAGACC
TATCAACCTCGAGTGCTGTCTGGAACTAAAGCGAGCGGGGCCCGATTTGGAATGTCGATT
GCTTCTGCTGGTGATTTGGACCAAAACGGATACGAAGACATTATTATTGGAGCTCCATAC
GAGGAATCGACTTCTACCAGCAGCGGCGTGGTTTATGTTTATTATAATTCACAACTTGGA
CTCAATGAAATAAATAGACAGAGAATACCCGGTACAACTTTGAAAAGTTCAATTCAGCAG
TTCGGGTATTCTGTACTTGGAGGAACTGCCATACCCGTCGATATTGACAATAACCATTAC
CCCGATGTTGTGGTCGGCGCACCGCGCAGCGACTCCGTGTTTTTGTTGAAAAGTCGACCG
ATTGTTGACGTTCAAGCTACCATTGAGCTGATACCACCAGTGTTTGACGTCATAAATTGC
TTGGCAGACGTCACTGCATGCTCGACGGTCAAAATTTGCATCAAAGCTAAATTTCGCAGA
GAACACGCGCCAGCTACTCTTGCTATGGATCTAAGCACTGTTCTGGACTCAAAGATTTTC
GATTCTCAGTCAAAACGAATAACATTTTTCGGGAAAACCACCAGCGTAGAAACGAAAACG
TTATCTGTTACTTCAACATATACATGTTTTGTATATTCCGTAAAACTGAACACCAACGCC
CTTGGAACGAGCGCCGGCGCATTAGAAATCTCTCCAACTATATCTTTCTCATACGACTTT
ACCGCTGCCCACAAACAAGCCGTTTTATCGGGAATAATTGATCCGCTAAAAGAGAAGAAA
ATTAGCGCGGATTGGACATTTAATAAAAGTTGTTCTGGTACAAACGGAAAATGCGTACAC
GACCTTTCAGTGTCAGCGACTTATTCCATAAGAACCGATAACTCGGTTCTAGTTCTTGGT
GCCAACCCTGGAATACTCTCAGTTGGGATAACAATCCGAAACAACGGACCTGACAATGCA
TTTTTCACAAGACTTAATATAACATCGGGCTCTCTTGCCTTCAGTAAGACTACCGGATCT
TGTATTCGAACTGTAAGCTCTGATGTTGTTTCTGGGATACTGGTGCTGTCATACCAACGT
ACTGCATCTGTTCTAGGGGATATGATGCTTGCAAACACCATGTGCCAATTTACCGTTGAA
TATTCCCTAGACTCCTTGACAAGTAAAGCAACATCAAAACAACTGCAGTTGAATGGAATA
ATATATTCAAATGCTGGTGGTGTTGCTGTCGCATCAGACCCAAACTTGCAAAACAACAAA
TTTGAGTTGAAACGAACAGTACAATACTCATCTGCTGTGTCCGTGAGCGGGCAATCCAAC
CCGGATTATTTGTTCTACGAACGATCCACCGAACCCAAAGTAGCTTACACGTTAACAGAT
GCTGTGCTGGGGGGTAACCGTACAAATATTGTCCATACGCACATGATAGAGAATGGCGGA
CCTCTTCGTGTCGCAAAACTTTTAACGACGTTTACTTGGCCAGAAGCGACCAAAGCAGGA
CTTCCGTTGCTTTATATTTACGACATTCAATGTTTGCCGGCTTCTAAGTGCACGTGTGAT
ACAGCAAACAAAATCAACTCACTCGGTTTGCACGTTAATATATCTCGAACAACGCCAATC
GATTTAACTTTTCCTGAAGCAACTACGATACTCCCATCCATTGTTAACTGCGCAGGCGTA
ATATGCAAAAGTATCTCATGTTCGATTTCTCAATTGGAACCTTTTAAATCAGTAACACTC
ACTGCTTCATTCAAGCTGTGGCTTCCTTCACTGAACAATAAACTGCTCGTAACAAACCTA
AGAAGCTTATTGAATGTAAATGTTGAAAACGAACCAATCTACCCGAATGCAAATCTCCTT
AGCACAGTGAGCACGACGGTATCGGTTAAGCTACCAGTCGCCACTGGGCAAGGAAATAAC
GCAGTGAACTTGGGAGCCATTATTGGTGGAATATTGGGCGGAATCGCATTGCTTTGTATT
ATGATTGCAGTCATGTGGAAGGCTGGGTTTTTCAAAAGCAAATATGGTGAAATGAAGCGA
GATGCGATGAGATCGAGTCTTCGAGATGCAAATGGCGATCTCGGTAGAAGTACAGACGAT
TTGGTCGATTCGCCATACGAGCTGGCAATAAACTGATACCTCGGCAATTTTGATGACCGG
TTTTGTAAAAAAAAAATTGTACATCTTTCGTAAATGTACAGCACAGCTTGAGACAAATAG
CAATAAACTGATATTTCTGCACTTTTGAAACCAGTTTCATAAATATTTTTGTACGCCTTT
TATAAATGTAAATAAACAGCTTGAGCAAAACGAT
| ProSiteProfiles |
Int_alpha_beta-p (IPR013519) - T[33-96] 6.157 - T[100-163] 5.966 - T[366-418] 5.752 - T[431-488] 7.171 - T[493-554] 13.552 - T[562-623] 13.934 - T[627-693] 12.567 |
| SMART |
Int_alpha_beta-p (IPR013519) - T[43-103] 22.0 - T[441-493] 170.0 - T[503-561] 4.4E-10 - T[572-630] 1.1E-14 - T[637-697] 0.064 |
| Gene3D |
Integrin_alpha_N (IPR028994) - T[46-173] 1.6E-132 - T[362-680] 1.6E-132 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[158-356] 5.09E-40 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[174-361] 1.6E-132 |
| SMART |
VWF_A (IPR002035) - T[179-357] 9.3E-36 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[181-352] 23.267 |
| Pfam |
VWF_A (IPR002035) - T[181-349] 6.5E-31 |
| PRINTS |
Integrin_alpha (IPR000413) - T[442-454] 1.9E-39 - T[500-520] 1.9E-39 - T[575-599] 1.9E-39 - T[645-666] 1.9E-39 - T[672-691] 1.9E-39 - T[1214-1233] 1.9E-39 |
| Pfam |
FG-GAP (IPR013517) - T[507-545] 2.0E-6 - T[579-614] 2.7E-7 |
| Pfam |
Integrin_alpha-2 (IPR013649) - T[678-1091] 3.7E-37 |
| SUPERFAMILY |
Integrin_dom_sf (IPR032695) - T[680-779] 7.32E-8 - T[992-1192] 7.85E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ITAM_HUMAN | 23.73 % | 200 | 4.47E-52 |
| ITA11_HUMAN | 24.305 % | 201 | 1.7E-52 |
| ITA2_HUMAN | 24.371 % | 206 | 6.44E-54 |