- Transcript 'KH2012:KH.C14.24.v2....' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.L102.7.v1....'
Transcript Model
Transcript Id
KH2012:KH.L102.7.v1.A.ND1-1
Possible name(s)
KCNB1; KCNB2; KCNF1
Gene model
Location
KhL102 [21,642 / 30,711]
Amino acid sequence
Length: 572
>KH.L102.7.v1.A.ND1-1
AVGLVCNNREYIHILTYDTSTDGGMNLNVGGRKFILKPKQLDRLPRSRLAKLYKTKSRTP
ASLALLCDDVRFYDVKNNDVKDSDVGTEYFFDRDPESFLYIMAAYRGASIHAPKSVCAMR
LSEEMKYWEIDLCLLDACCTERLETATTLTGLNMKNISQKMEQYYLKQEEIKFLPKMTSW
DDVTYNLHTLRLRAWSVVEDPSSSIIAKIWTLTSVAFIIISLVCFVTGTVPGYYEKDAHG
QEHEIESLATIEKVCMVWFTIEYITRLIVAPEKVYFIRQILNVIDLLTIIPFFIQQFKPE
AANGIQTWQHLTQVFRIMRVLRIFRLGRHSNGLKLLCVTLYQSSNELIMLSIFLMIGIVM
LATLVFSFESHDLFPNLGEALWFAAVTITTVGYGDIVPETIAGKVVTSTSFLVGVIAIAM
PIHPIISNFSNCYRTQREMENAFKRALKVQKKDQERDKQRKSKTSLVALTPQALLSECDA
TTTDTDTDMVLTNFHKAERERRYTFAAIGENRSLSRCKSGKRLSLARKKRQSCVGSLVAN
SVFSVSAGLDLSDHDKKEDVCYCIFCTDADDE
Nucleotide sequence
Length: 2,260
>KH2012:KH.L102.7.v1.A.ND1-1
AGGTACATACACATACCTAGTGTTGTTTAATATAGTTAGTACATTATAAGCGGTTGGTTT
GGTTTGTAATAACAGAGAATATATTCATATTTTAACATACGACACTTCTACTGATGGCGG
AATGAACCTAAACGTCGGCGGGAGAAAGTTTATTTTGAAACCAAAACAACTTGACCGACT
TCCACGCAGCAGACTCGCAAAGCTTTATAAAACCAAATCCCGAACTCCGGCGAGCTTGGC
GCTTCTTTGCGATGACGTCAGATTTTATGACGTAAAAAATAATGATGTCAAAGACAGTGA
CGTAGGCACCGAATACTTTTTCGACCGAGATCCGGAGTCGTTTCTTTATATTATGGCGGC
TTACAGAGGAGCTTCCATCCATGCCCCGAAATCTGTATGCGCGATGCGGTTGAGCGAGGA
GATGAAATATTGGGAAATTGACTTATGTTTGCTCGATGCTTGTTGTACAGAGAGGTTAGA
GACCGCCACAACGCTCACTGGTCTCAACATGAAGAATATATCGCAGAAGATGGAGCAGTA
TTATTTAAAGCAGGAAGAAATCAAATTTCTACCCAAGATGACGTCATGGGATGACGTCAC
TTATAATTTGCACACGCTTCGACTACGAGCTTGGTCTGTAGTGGAAGATCCGTCATCGTC
TATCATTGCGAAGATCTGGACTCTGACGTCAGTCGCCTTCATTATTATATCGCTCGTTTG
TTTCGTAACCGGGACAGTCCCTGGGTATTATGAAAAAGACGCGCATGGACAAGAACACGA
AATAGAATCGTTGGCTACGATAGAGAAGGTGTGCATGGTATGGTTCACCATCGAATACAT
AACACGGCTCATAGTTGCTCCAGAGAAGGTTTATTTTATCCGGCAGATCCTGAACGTGAT
CGACCTTCTTACAATTATTCCGTTCTTCATCCAACAGTTTAAACCAGAAGCTGCTAATGG
TATCCAGACATGGCAGCATCTAACACAGGTGTTCCGAATCATGCGCGTCTTAAGAATATT
CCGCCTTGGACGTCACTCGAATGGATTGAAACTATTATGTGTGACATTATATCAGAGCTC
CAATGAGTTAATCATGTTGTCCATATTCCTTATGATTGGAATCGTGATGCTGGCAACACT
AGTTTTCTCGTTCGAAAGCCACGATCTTTTCCCCAACCTTGGGGAAGCATTATGGTTTGC
TGCTGTTACTATTACTACTGTGGGGTATGGGGATATTGTGCCTGAGACAATTGCAGGCAA
AGTTGTAACCTCCACTTCTTTCCTTGTTGGTGTGATCGCCATAGCGATGCCAATTCATCC
AATTATTTCTAATTTCTCAAATTGTTACCGAACACAACGTGAGATGGAAAATGCATTTAA
GAGGGCGCTTAAAGTACAGAAAAAAGACCAAGAAAGAGACAAGCAAAGAAAATCCAAAAC
TTCCCTCGTCGCATTGACACCACAGGCTTTATTAAGTGAATGTGATGCCACCACCACGGA
CACAGATACTGATATGGTCCTTACAAACTTTCATAAAGCTGAAAGAGAAAGAAGGTACAC
TTTTGCTGCAATTGGTGAAAACCGTAGCTTATCCAGATGTAAAAGTGGAAAGAGGTTGAG
CCTTGCGAGGAAAAAGAGACAATCATGTGTCGGGAGTTTGGTGGCAAACTCTGTGTTTTC
CGTGTCCGCTGGGTTGGATTTATCTGACCATGATAAAAAGGAGGATGTTTGTTACTGTAT
ATTCTGTACAGATGCGGATGATGAATGAATATGTGTGTTATTGAATTAATGGATGGATCT
TATTTATCCTCACGTGGCAGGGTAACCAGAGTCATTATTACACGGGTGTTCTGTTTCATA
CACCTCATGTCCGCTCACAAGTTACCACGTATGTAACTTATTTATCCTTGCATGGCTGGG
CAAGGATAGTCGTTATGACACGGGTGTTCTGTTTCATACGAATCGTGCACACTTATGAAT
TACCCCGTATGTGACTTTGTAAAGGATTTTTTGGGTGTAAGGTGTATGGATGCATTATGT
GTGTCTGATGTATAAGACACCCATGTTATAACTCAACAGTGAGCATTAGGTGTATTTGCT
GTTCGATACAAACCTCATATAAACTGCCATTTTTAAATCAGAGTCGTAGAGAAAGGTATT
TCTATTGCTCTGTTTCAAATCTCCGCGTTTGTGTCGAAAGCGCCAGTATTTTTGTCGAAA
CCACCGAACATGTGCGCTCAAATAAAATATATACAAAGTT
| PANTHER |
VG_K_chnl (IPR028325) - T[24-478] 4.4E-132 |
| SUPERFAMILY |
SKP1/BTB/POZ_sf (IPR011333) - T[25-143] 3.92E-18 |
| Pfam |
T1-type_BTB (IPR003131) - T[26-138] 1.3E-17 |
| PRINTS |
K_chnl_volt-dep_Kv (IPR003968) - T[88-98] 8.1E-14 - T[322-330] 8.1E-14 - T[346-360] 8.1E-14 - T[414-425] 8.1E-14 |
| PRINTS |
VG_K_chnl (IPR028325) - T[88-107] 1.8E-70 - T[201-229] 1.8E-70 - T[250-273] 1.8E-70 - T[276-296] 1.8E-70 - T[317-343] 1.8E-70 - T[346-369] 1.8E-70 - T[374-396] 1.8E-70 - T[403-429] 1.8E-70 |
| PRINTS |
K_chnl_volt-dep_Kv3 (IPR003974) - T[89-102] 9.6E-8 - T[104-119] 9.6E-8 - T[122-143] 9.6E-8 - T[198-210] 9.6E-8 |
| Gene3D |
Volt_channel_dom_sf (IPR027359) - T[182-329] 2.1E-38 |
| Pfam |
Ion_trans_dom (IPR005821) - T[208-435] 1.4E-30 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| KCNB1_HUMAN | 37.757 % | 282 | 4.9E-85 |
| KCNB2_HUMAN | 36.384 % | 286 | 3.84E-86 |
| KCNF1_HUMAN | 33.267 % | 264 | 7.51E-82 |