Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L106.11.v1.A.nonSL4-2

Possible name(s)

NSMCE2

Gene model

KH2012:KH.L106.11

Location

KhL106 [28,243 / 30,378]

Sequences

Amino acid sequence

Length: 218

>KH.L106.11.v1.A.nonSL4-2
EKMSEYVQTGKTEVIEVGIELLENKIENSGMDKLQECIGGLIRAEQRVKAFTHSVDSLKS
RWQNGELEDSMDIVEELEADFKRETEKVTNDPSLWDHEFMTSFIEQMKTIDAGFEFNTGV
KPRGDDDVMQMAGEATTTCPITQCQMADPVKDKICGHSFEKQAILAHIAQCQKRKRPAKC
PSTGCTNIIDRNNLESNVALKQLIQRRVKDSNQPQSSV

Nucleotide sequence

Length: 961

>KH2012:KH.L106.11.v1.A.nonSL4-2
GAGAAAATGTCGGAATATGTTCAAACGGGGAAAACTGAAGTGATTGAAGTCGGAATAGAA
CTACTCGAAAATAAAATTGAAAACTCTGGCATGGATAAGTTGCAAGAATGCATCGGTGGG
TTGATACGCGCTGAACAACGGGTCAAAGCATTCACTCATTCTGTTGACTCGCTGAAGTCA
CGTTGGCAAAACGGGGAACTTGAAGACTCCATGGATATTGTGGAGGAACTAGAAGCAGAT
TTTAAGCGCGAAACAGAGAAAGTAACGAACGACCCGAGTTTGTGGGATCATGAGTTCATG
ACCTCGTTTATCGAACAAATGAAAACAATCGATGCCGGATTTGAATTTAACACTGGTGTG
AAGCCTCGTGGTGATGATGATGTCATGCAGATGGCGGGCGAGGCAACCACTACGTGCCCG
ATAACACAGTGCCAGATGGCGGATCCTGTTAAAGATAAAATATGCGGCCACAGTTTTGAG
AAGCAAGCCATCCTAGCGCATATTGCGCAATGTCAGAAACGTAAACGACCTGCAAAGTGT
CCATCAACTGGTTGTACGAACATCATCGATCGGAACAATTTGGAATCGAACGTCGCGCTA
AAACAATTAATCCAACGAAGGGTTAAAGATTCCAACCAACCACAGTCCAGCGTTTGAGGT
CACGACCCCTGAATACCAGTACAAAGTATCTAGGGATCATCCCAACTATTGTCCGAATAC
GCAGTATAACTTTATTTGATCTTTATTGATAATAATGAACATTACGAATGCTGACCACGA
TTCCATGTATATTGGTTCAACACAACTTAAGTAACTTGTTCACCATCTCCCCGATGCCGT
CAAACACACGGTGCACACTGGTGTTGCACATGTACGCCGGAGTCGTCACAATGCGCATAT
TCGTGTCCACATGACATTCGTGTTGTTCGAGGTTAAGGAATATTAAACTTCTGTTAATTT
A

InterProScan

PANTHER	Nse2(Mms21) (IPR026846) - T[4-216] 4.3E-38
Pfam	Znf_MIZ (IPR004181) - T[127-186] 7.0E-15
Gene3D	Znf_RING/FYVE/PHD (IPR013083) - T[132-217] 4.4E-22
CDD	Znf_MIZ (IPR004181) - T[137-206] 2.03514E-29

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
NSE2_HUMAN	25.481 %	74.7	2.59E-16