Aniseed - Transcript Card

Transcript 'KH2012:KH.L106.11.v1...'

Transcript Model

Transcript Id

KH2012:KH.L106.11.v1.A.nonSL6-2

Possible name(s)

NSMCE2

Gene model

KH2012:KH.L106.11

Location

KhL106 [28,179 / 30,378]

Sequences

Amino acid sequence

Length: 239

>KH.L106.11.v1.A.nonSL6-2
VDLKMSDTVGSRHLDGAMHNLEKMSEYVQTGKTEVIEVGIELLENKIENSGMDKLQECIG
GLIRAEQRVKAFTHSVDSLKSRWQNGELEDSMDIVEELEADFKRETEKVTNDPSLWDHEF
MTSFIEQMKTIDAGFEFNTGVKPRGDDDVMQMAGEATTTCPITQCQMADPVKDKICGHSF
EKQAILAHIAQCQKRKRPAKCPSTGCTNIIDRNNLESNVALKQLIQRRVKDSNQPQSSV

Nucleotide sequence

Length: 1,025

>KH2012:KH.L106.11.v1.A.nonSL6-2
AGTTGATTTGAAAATGTCTGACACCGTAGGCAGTCGACACTTGGACGGGGCAATGCATAA
CTTGGAGAAAATGTCGGAATATGTTCAAACGGGGAAAACTGAAGTGATTGAAGTCGGAAT
AGAACTACTCGAAAATAAAATTGAAAACTCTGGCATGGATAAGTTGCAAGAATGCATCGG
TGGGTTGATACGCGCTGAACAACGGGTCAAAGCATTCACTCATTCTGTTGACTCGCTGAA
GTCACGTTGGCAAAACGGGGAACTTGAAGACTCCATGGATATTGTGGAGGAACTAGAAGC
AGATTTTAAGCGCGAAACAGAGAAAGTAACGAACGACCCGAGTTTGTGGGATCATGAGTT
CATGACCTCGTTTATCGAACAAATGAAAACAATCGATGCCGGATTTGAATTTAACACTGG
TGTGAAGCCTCGTGGTGATGATGATGTCATGCAGATGGCGGGCGAGGCAACCACTACGTG
CCCGATAACACAGTGCCAGATGGCGGATCCTGTTAAAGATAAAATATGCGGCCACAGTTT
TGAGAAGCAAGCCATCCTAGCGCATATTGCGCAATGTCAGAAACGTAAACGACCTGCAAA
GTGTCCATCAACTGGTTGTACGAACATCATCGATCGGAACAATTTGGAATCGAACGTCGC
GCTAAAACAATTAATCCAACGAAGGGTTAAAGATTCCAACCAACCACAGTCCAGCGTTTG
AGGTCACGACCCCTGAATACCAGTACAAAGTATCTAGGGATCATCCCAACTATTGTCCGA
ATACGCAGTATAACTTTATTTGATCTTTATTGATAATAATGAACATTACGAATGCTGACC
ACGATTCCATGTATATTGGTTCAACACAACTTAAGTAACTTGTTCACCATCTCCCCGATG
CCGTCAAACACACGGTGCACACTGGTGTTGCACATGTACGCCGGAGTCGTCACAATGCGC
ATATTCGTGTCCACATGACATTCGTGTTGTTCGAGGTTAAGGAATATTAAACTTCTGTTA
ATTTA

InterProScan

PANTHER	Nse2(Mms21) (IPR026846) - T[9-237] 2.0E-40
Pfam	Znf_MIZ (IPR004181) - T[148-207] 8.2E-15
Gene3D	Znf_RING/FYVE/PHD (IPR013083) - T[153-238] 5.3E-22
CDD	Znf_MIZ (IPR004181) - T[158-227] 1.52604E-29

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
NSE2_HUMAN	24.771 %	78.6	1.63E-17