Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L106.11.v1.A.SL1-2

Possible name(s)

NSMCE2

Gene model

KH2012:KH.L106.11

Location

KhL106 [28,174 / 30,378]

Sequences

Amino acid sequence

Length: 241

>KH.L106.11.v1.A.SL1-2
ILVDLKMSDTVGSRHLDGAMHNLEKMSEYVQTGKTEVIEVGIELLENKIENSGMDKLQEC
IGGLIRAEQRVKAFTHSVDSLKSRWQNGELEDSMDIVEELEADFKRETEKVTNDPSLWDH
EFMTSFIEQMKTIDAGFEFNTGVKPRGDDDVMQMAGEATTTCPITQCQMADPVKDKICGH
SFEKQAILAHIAQCQKRKRPAKCPSTGCTNIIDRNNLESNVALKQLIQRRVKDSNQPQSS
V

Nucleotide sequence

Length: 1,030

>KH2012:KH.L106.11.v1.A.SL1-2
ATTTTAGTTGATTTGAAAATGTCTGACACCGTAGGCAGTCGACACTTGGACGGGGCAATG
CATAACTTGGAGAAAATGTCGGAATATGTTCAAACGGGGAAAACTGAAGTGATTGAAGTC
GGAATAGAACTACTCGAAAATAAAATTGAAAACTCTGGCATGGATAAGTTGCAAGAATGC
ATCGGTGGGTTGATACGCGCTGAACAACGGGTCAAAGCATTCACTCATTCTGTTGACTCG
CTGAAGTCACGTTGGCAAAACGGGGAACTTGAAGACTCCATGGATATTGTGGAGGAACTA
GAAGCAGATTTTAAGCGCGAAACAGAGAAAGTAACGAACGACCCGAGTTTGTGGGATCAT
GAGTTCATGACCTCGTTTATCGAACAAATGAAAACAATCGATGCCGGATTTGAATTTAAC
ACTGGTGTGAAGCCTCGTGGTGATGATGATGTCATGCAGATGGCGGGCGAGGCAACCACT
ACGTGCCCGATAACACAGTGCCAGATGGCGGATCCTGTTAAAGATAAAATATGCGGCCAC
AGTTTTGAGAAGCAAGCCATCCTAGCGCATATTGCGCAATGTCAGAAACGTAAACGACCT
GCAAAGTGTCCATCAACTGGTTGTACGAACATCATCGATCGGAACAATTTGGAATCGAAC
GTCGCGCTAAAACAATTAATCCAACGAAGGGTTAAAGATTCCAACCAACCACAGTCCAGC
GTTTGAGGTCACGACCCCTGAATACCAGTACAAAGTATCTAGGGATCATCCCAACTATTG
TCCGAATACGCAGTATAACTTTATTTGATCTTTATTGATAATAATGAACATTACGAATGC
TGACCACGATTCCATGTATATTGGTTCAACACAACTTAAGTAACTTGTTCACCATCTCCC
CGATGCCGTCAAACACACGGTGCACACTGGTGTTGCACATGTACGCCGGAGTCGTCACAA
TGCGCATATTCGTGTCCACATGACATTCGTGTTGTTCGAGGTTAAGGAATATTAAACTTC
TGTTAATTTA

InterProScan

PANTHER	Nse2(Mms21) (IPR026846) - T[11-239] 2.4E-40
Pfam	Znf_MIZ (IPR004181) - T[150-209] 8.4E-15
Gene3D	Znf_RING/FYVE/PHD (IPR013083) - T[155-240] 5.4E-22
CDD	Znf_MIZ (IPR004181) - T[160-229] 1.57296E-29

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
NSE2_HUMAN	24.771 %	78.6	1.96E-17