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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L170.28.v2...'
  2. Transcript 'KH2012:KH.L106.11.v2...'

Transcript Model

Transcript Id

KH2012:KH.L106.11.v2.A.nonSL2-2

Possible name(s)

NSMCE2

Location

KhL106 [28,210 / 30,378]

Sequences

Amino acid sequence

Length: 199

>KH.L106.11.v2.A.nonSL2-2
IIVFIPVENSGMDKLQECIGGLIRAEQRVKAFTHSVDSLKSRWQNGELEDSMDIVEELEA
DFKRETEKVTNDPSLWDHEFMTSFIEQMKTIDAGFEFNTGVKPRGDDDVMQMAGEATTTC
PITQCQMADPVKDKICGHSFEKQAILAHIAQCQKRKRPAKCPSTGCTNIIDRNNLESNVA
LKQLIQRRVKDSNQPQSSV

Nucleotide sequence

Length: 1,189

>KH2012:KH.L106.11.v2.A.nonSL2-2
AGTCGACACTTGGACGGGGCAATGCATAACTTGGAGAAAATGTCGGAATATGTTCAAACG
GGGAAAACTGAAGTGATTGAAGTCGGAATAGAACTACTCGAAAATAAAAGTTTGCCACAT
AATTTGAAATAATCTGATGTATTAATACAGTATCATTTATATACTTGGACGATATTTATT
GTTATTTTGATGTAGTGTATGTGTTTGGAGTTTGGTTATTTGACCCCTTCTTTTCATTGT
TTTAATTAGTTTGATCTTCGCTATCGTATTCAATGAGATAAATAAATTATTGTTTTTATT
CCAGTTGAAAACTCTGGCATGGATAAGTTGCAAGAATGCATCGGTGGGTTGATACGCGCT
GAACAACGGGTCAAAGCATTCACTCATTCTGTTGACTCGCTGAAGTCACGTTGGCAAAAC
GGGGAACTTGAAGACTCCATGGATATTGTGGAGGAACTAGAAGCAGATTTTAAGCGCGAA
ACAGAGAAAGTAACGAACGACCCGAGTTTGTGGGATCATGAGTTCATGACCTCGTTTATC
GAACAAATGAAAACAATCGATGCCGGATTTGAATTTAACACTGGTGTGAAGCCTCGTGGT
GATGATGATGTCATGCAGATGGCGGGCGAGGCAACCACTACGTGCCCGATAACACAGTGC
CAGATGGCGGATCCTGTTAAAGATAAAATATGCGGCCACAGTTTTGAGAAGCAAGCCATC
CTAGCGCATATTGCGCAATGTCAGAAACGTAAACGACCTGCAAAGTGTCCATCAACTGGT
TGTACGAACATCATCGATCGGAACAATTTGGAATCGAACGTCGCGCTAAAACAATTAATC
CAACGAAGGGTTAAAGATTCCAACCAACCACAGTCCAGCGTTTGAGGTCACGACCCCTGA
ATACCAGTACAAAGTATCTAGGGATCATCCCAACTATTGTCCGAATACGCAGTATAACTT
TATTTGATCTTTATTGATAATAATGAACATTACGAATGCTGACCACGATTCCATGTATAT
TGGTTCAACACAACTTAAGTAACTTGTTCACCATCTCCCCGATGCCGTCAAACACACGGT
GCACACTGGTGTTGCACATGTACGCCGGAGTCGTCACAATGCGCATATTCGTGTCCACAT
GACATTCGTGTTGTTCGAGGTTAAGGAATATTAAACTTCTGTTAATTTA

InterProScan

PANTHER
Nse2(Mms21) (IPR026846) - T[10-197] 2.9E-36
Pfam
Znf_MIZ (IPR004181) - T[108-167] 5.9E-15
Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[112-198] 3.3E-22
CDD
Znf_MIZ (IPR004181) - T[118-187] 1.50188E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NSE2_HUMAN 32 % 72.8 9.0E-16