Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L106.11.v2.A.nonSL5-2

Possible name(s)

NSMCE2

Gene model

KH2012:KH.L106.11

Location

KhL106 [28,235 / 30,378]

Sequences

Amino acid sequence

Length: 199

>KH.L106.11.v2.A.nonSL5-2
IIVFIPVENSGMDKLQECIGGLIRAEQRVKAFTHSVDSLKSRWQNGELEDSMDIVEELEA
DFKRETEKVTNDPSLWDHEFMTSFIEQMKTIDAGFEFNTGVKPRGDDDVMQMAGEATTTC
PITQCQMADPVKDKICGHSFEKQAILAHIAQCQKRKRPAKCPSTGCTNIIDRNNLESNVA
LKQLIQRRVKDSNQPQSSV

Nucleotide sequence

Length: 1,164

>KH2012:KH.L106.11.v2.A.nonSL5-2
ATAACTTGGAGAAAATGTCGGAATATGTTCAAACGGGGAAAACTGAAGTGATTGAAGTCG
GAATAGAACTACTCGAAAATAAAAGTTTGCCACATAATTTGAAATAATCTGATGTATTAA
TACAGTATCATTTATATACTTGGACGATATTTATTGTTATTTTGATGTAGTGTATGTGTT
TGGAGTTTGGTTATTTGACCCCTTCTTTTCATTGTTTTAATTAGTTTGATCTTCGCTATC
GTATTCAATGAGATAAATAAATTATTGTTTTTATTCCAGTTGAAAACTCTGGCATGGATA
AGTTGCAAGAATGCATCGGTGGGTTGATACGCGCTGAACAACGGGTCAAAGCATTCACTC
ATTCTGTTGACTCGCTGAAGTCACGTTGGCAAAACGGGGAACTTGAAGACTCCATGGATA
TTGTGGAGGAACTAGAAGCAGATTTTAAGCGCGAAACAGAGAAAGTAACGAACGACCCGA
GTTTGTGGGATCATGAGTTCATGACCTCGTTTATCGAACAAATGAAAACAATCGATGCCG
GATTTGAATTTAACACTGGTGTGAAGCCTCGTGGTGATGATGATGTCATGCAGATGGCGG
GCGAGGCAACCACTACGTGCCCGATAACACAGTGCCAGATGGCGGATCCTGTTAAAGATA
AAATATGCGGCCACAGTTTTGAGAAGCAAGCCATCCTAGCGCATATTGCGCAATGTCAGA
AACGTAAACGACCTGCAAAGTGTCCATCAACTGGTTGTACGAACATCATCGATCGGAACA
ATTTGGAATCGAACGTCGCGCTAAAACAATTAATCCAACGAAGGGTTAAAGATTCCAACC
AACCACAGTCCAGCGTTTGAGGTCACGACCCCTGAATACCAGTACAAAGTATCTAGGGAT
CATCCCAACTATTGTCCGAATACGCAGTATAACTTTATTTGATCTTTATTGATAATAATG
AACATTACGAATGCTGACCACGATTCCATGTATATTGGTTCAACACAACTTAAGTAACTT
GTTCACCATCTCCCCGATGCCGTCAAACACACGGTGCACACTGGTGTTGCACATGTACGC
CGGAGTCGTCACAATGCGCATATTCGTGTCCACATGACATTCGTGTTGTTCGAGGTTAAG
GAATATTAAACTTCTGTTAATTTA

InterProScan

PANTHER	Nse2(Mms21) (IPR026846) - T[10-197] 2.9E-36
Pfam	Znf_MIZ (IPR004181) - T[108-167] 5.9E-15
Gene3D	Znf_RING/FYVE/PHD (IPR013083) - T[112-198] 3.3E-22
CDD	Znf_MIZ (IPR004181) - T[118-187] 1.50188E-29

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
NSE2_HUMAN	32 %	72.8	9.0E-16