- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Molecular Tool 'pBra-Ci-Rel1-GFP' >
- Transcript 'KH2012:KH.L112.15.v2...'
Transcript Model
Transcript Id
KH2012:KH.L112.15.v2.A.ND3-1
Possible name(s)
ANK1; ANK3; TRPA1
Gene model
Location
KhL112 [45,639 / 76,676]
Amino acid sequence
Length: 1,036
>KH.L112.15.v2.A.ND3-1
TTCLVIPLEAIVIISATDDYKSTPLHWAVCNDSSAGVKFLLDKGGDPNLRNNTGYGALHL
AAHKNSLNALQALIDHKVDLNARGTANLTAMHVAASLDHEKVFTMLLSNGAKPCMACSQG
YRPLHTAALAGSKKVMEILLNRCSKYGYSSESLLSFSDKENCSPLHCAVTGGNVNAIKLC
LSYGAKLNVKQADDSTPMHMVCSQGNLEIVQLMFDYSPDNARASLSMLDKQDHSPLHKAA
MFNHPALIRFLIDKGADAELLDADQRTPLLLAASRECWDAVWALIELNANLYVKDKEEKN
FIHIVVLKGGDVRKVVGKRSADDVKEICCNVFSVSGCTPLHYACQEGNLASLKWLMQLGV
SARLKTNTKQSPLHFASMYGRYNACCRLLDSDQGPHIINEKDDKGMTPLHFAAANGHVKI
VQLLLNRGGLIHRNVMGESPLHVAASNGWTKTIRLLVECHFHLIDQIEEEGNTALHLATK
AGHVTAVELLMDLNASFMRNESGSTCFTNAIIEQNRDVALAIVQHNRWEEAMQTFHKKGE
TVIPPILLLIKYMPDVCVVSMTCMEGLLGRPCHGCLSASGTPLEQRWSNSTELSACATQC
PLLTYIISGKEIIICVNAYGRIFHGLYLLFYMMSLFPITYLVSTIDSGIHFEKMSETYIT
VNDTNGTLTTTRAPPIVFSRFQIAMMIQLTVVNLLEILKELGQMYQQRGEYFRDFTNVTE
WTLYVTSVLFAVPFLTGYPLHWQFEVGAVAVFLGWFNLLVFLQKFDLAGIYVVMFMQILK
TLIQVLLVFSFLLVAFSLAFTVLMKNEADQAFSNPIIAMMRVITMLLGEIGYVEKFLEPY
VDGNPSTFHFSVPSLVLLCLFIIVMPILLMNLLIGLAVGDIASVQNNAVLQRLAMQVHLH
TSIESRLPTRFLSRVDKPSITIYPNKCMGAFRSAWATVFKHAGVQSDYGGDTADLSSDPS
MDHLCVELMKQKQRVKSIQAALDKQHDLLRLIVQKMEIRSEAEDHDEGIGPSIPSRMASI
SGTKLLAMRAVKSVRS
Nucleotide sequence
Length: 4,674
>KH2012:KH.L112.15.v2.A.ND3-1
ATGAGTGTGAGTACTGAACAACTGACTGGAGATTACGATCGAGTTAAAAGCGGGTTTGGT
GAAGACGTTAAATACGAGGGTCATGAGGAACTGAATTGTTTCGAAGCTTTGCTGCTTCGG
CTGAGTCATGCTACGTATGACGTATCGACGCCAAAGTTACGTAGTGATGAGTCAGCAGAA
AGTGAGGACCTCGAGGGGGCCGTGACCCCGTTTAAGTTTTCCATGATGGAAGAACTTGAG
GTCGAAGAACGTCGTGAGAAGAAAGTCAATGTTGAGATTATGGAAATCGCCGCCCAGGGG
AAGACGAAACAACTTTCAGCTCTTTGCAATGCTAACCCTGATAGATTATTCTCACGTGAC
CGGAAGGGAGCCACGGTGCTCCACCATGCGGCGGCGTTTGGTCACGTGTCCACCATGAAC
TACGTGCTTGGTTATCCCACTGGAGGCGATCGTGATAATCTCCGCCACCGACGACTACAA
GTCCACCCCCCTACATTGGGCTGTTTGTAACGATTCATCCGCTGGAGTGAAGTTCCTTCT
CGATAAAGGGGGAGACCCCAACCTGAGAAACAACACGGGGTATGGAGCTCTCCACTTGGC
GGCGCACAAAAACTCACTTAACGCCCTACAAGCGTTGATCGACCACAAGGTTGATTTAAA
CGCACGAGGAACCGCCAACCTCACAGCGATGCATGTGGCAGCTTCATTAGATCATGAGAA
AGTTTTCACGATGTTGTTAAGCAATGGTGCCAAACCTTGCATGGCTTGTAGTCAAGGTTA
CAGACCTCTACATACGGCGGCATTGGCTGGATCAAAGAAAGTTATGGAGATCTTATTAAA
CCGATGTTCCAAGTATGGCTACTCAAGTGAGTCCCTGCTTTCCTTCAGCGATAAAGAGAA
CTGTAGCCCTCTGCATTGTGCTGTTACTGGTGGGAACGTTAACGCTATTAAACTTTGCCT
CAGTTACGGAGCGAAATTGAACGTAAAACAAGCTGATGATTCGACGCCAATGCACATGGT
GTGTTCCCAGGGGAATCTGGAAATCGTTCAGTTAATGTTCGATTATTCTCCTGATAATGC
AAGAGCAAGTTTGTCGATGTTGGATAAACAGGATCATTCACCATTGCACAAAGCCGCCAT
GTTCAACCACCCAGCGTTGATTCGCTTCCTCATCGATAAAGGAGCCGACGCTGAATTGTT
GGACGCCGACCAACGAACTCCTCTTCTACTTGCAGCCTCCAGGGAATGTTGGGACGCGGT
GTGGGCGCTGATTGAACTGAACGCGAATCTTTATGTTAAAGACAAAGAGGAGAAGAATTT
CATCCACATAGTGGTGCTAAAGGGTGGTGACGTAAGAAAGGTGGTTGGGAAACGAAGCGC
TGATGACGTCAAAGAGATTTGTTGCAACGTATTTTCGGTAAGTGGATGTACACCTTTACA
TTACGCGTGCCAGGAAGGCAACCTCGCAAGCTTAAAGTGGTTGATGCAGTTGGGAGTCAG
CGCAAGGTTGAAGACGAACACCAAACAATCCCCGTTACATTTCGCTTCAATGTACGGAAG
ATACAACGCTTGTTGTAGATTACTGGACAGTGACCAGGGTCCGCACATAATCAACGAGAA
AGACGACAAAGGGATGACGCCATTGCATTTCGCCGCCGCTAATGGGCACGTGAAAATCGT
ACAACTTCTTCTTAATAGAGGCGGGCTTATTCATCGCAACGTCATGGGGGAATCCCCACT
ACACGTAGCGGCGTCTAACGGATGGACGAAAACGATTCGTTTGTTGGTTGAATGCCATTT
CCACCTCATAGACCAGATAGAGGAAGAAGGGAACACCGCCCTCCACCTCGCTACCAAGGC
TGGCCACGTCACTGCCGTTGAATTATTGATGGATTTGAACGCTTCGTTCATGAGGAATGA
ATCCGGATCGACATGTTTCACCAACGCTATCATTGAACAGAATAGAGACGTGGCGCTTGC
CATTGTACAGCACAACAGGTGGGAGGAAGCAATGCAAACTTTCCATAAGAAAGGGGAGAC
GGTCATCCCACCAATATTGTTGCTTATTAAATATATGCCGGATGTCTGTGTAGTAAGTAT
GACGTGTATGGAAGGTTTACTTGGTAGGCCATGCCATGGGTGTTTGAGCGCCTCTGGAAC
ACCATTGGAGCAACGATGGTCGAATTCAACCGAGTTGAGTGCTTGCGCCACCCAGTGTCC
GTTGCTTACTTACATCATAAGTGGTAAGGAAATAATAATATGTGTGAACGCATATGGCCG
AATATTCCACGGGTTGTACCTCCTCTTCTACATGATGAGTCTCTTCCCCATCACTTACCT
CGTCTCCACCATCGACTCCGGAATCCACTTTGAAAAAATGTCGGAAACTTACATTACAGT
AAACGACACCAACGGTACCCTCACAACAACCAGAGCCCCACCGATCGTTTTCTCGAGGTT
TCAAATAGCAATGATGATTCAACTAACTGTGGTTAACTTGTTGGAAATATTGAAGGAGCT
TGGACAAATGTATCAGCAGAGAGGGGAATACTTCCGAGACTTCACCAACGTCACAGAGTG
GACTTTATACGTCACAAGCGTGTTGTTCGCTGTTCCCTTCCTCACAGGTTACCCTTTGCA
TTGGCAGTTTGAAGTTGGAGCTGTAGCCGTGTTTCTTGGATGGTTCAACTTACTCGTGTT
TTTGCAAAAGTTTGACCTTGCCGGCATCTACGTTGTAATGTTCATGCAGATATTGAAAAC
ATTGATTCAAGTCTTGCTCGTGTTTTCGTTCCTGCTCGTCGCGTTTTCACTCGCATTCAC
TGTTCTCATGAAAAACGAGGCGGACCAAGCTTTCAGCAACCCGATTATAGCAATGATGCG
CGTCATCACAATGTTGTTGGGTGAGATTGGTTACGTTGAGAAGTTCCTGGAACCTTACGT
GGATGGGAATCCATCAACCTTCCACTTCAGCGTCCCTAGTTTAGTGTTGTTGTGTTTATT
TATTATCGTAATGCCGATATTGCTGATGAATCTACTGATTGGTTTGGCTGTTGGAGATAT
TGCGTCTGTGCAAAACAACGCTGTGCTACAGAGACTAGCGATGCAGGTTCACCTCCACAC
GTCGATTGAATCAAGGTTACCAACAAGGTTTCTATCCCGGGTTGACAAGCCATCCATCAC
AATCTACCCAAACAAGTGCATGGGTGCGTTTAGGTCAGCGTGGGCAACGGTGTTCAAGCA
TGCAGGCGTTCAATCCGATTACGGAGGCGACACGGCCGATCTTTCAAGCGATCCAAGTAT
GGACCATCTGTGTGTTGAACTTATGAAGCAAAAACAAAGAGTGAAGTCGATCCAAGCTGC
TCTGGATAAACAACACGACCTGCTGAGGTTGATCGTGCAAAAGATGGAGATCCGATCGGA
GGCGGAGGACCATGATGAAGGGATTGGGCCTTCCATACCATCAAGGATGGCTTCTATATC
TGGGACCAAACTTCTTGCTATGAGGGCCGTGAAGTCAGTGCGGTCATAGGAACTGTCAAT
CAAACGCAACCTGTCAATCAAACATACTGGACCTGCCAATCAAACATACATAACTTGTCA
AACAGACTTAACCTGGCAATCAAACAGTGCCATTATTAAACTCATTATTTTCTTTTGTAT
TGGCAAGGCTTCACAGCGAAAAATGCCAACTGAGATTTCAGCCTATTACCCCAACACCCA
AGGTGCTACAACCTATTAGTGGCCACACTGGCTTTGTAACTTCAGGTTTTAATTGACGCT
ACCATTATTGTAGGCTTGTTTACTTTTGGGCAAGACACTTAGCAGCAATTGCTTCAACCG
AATGGTAACTAATGAGTTATCTAGATTCTTAGGAAAAAAGTAACTCCTGCAAAGTTACAT
ATATGATAACTTGTAAGTGGCATGAGGTTTATGAAACAGAACACCTGTGTTATGAAATTT
AAAGTTTGCCCACTCGGATAAATAAGTTTCATTCATTTGCTCAATAACTCTTAGTCCAAT
TCTTTATTCTAAGCTTTCACTTCTAATCTCGGTTAAAACTTTTTATTGACACATAAAAGT
TGTTTTGTTTTTGTGAAAAACTTCTTCCGATATTTGAACCACAGTTTTATGTTGCACAGT
AAAGCAACCCAAGGAGAGTTTTGGTTGCTGTCTGTAGTGATATACAATCTCCATGTTTAT
TTTCTAGGCCTTATTCAACCTATTTTCCTTCCTTGTTTGTGCCATAGTGGTCAGGCAATT
AACCAAAAGATACCGATACCCCAAGGATACTTAAACAGTAATACTACAACTACTTGTAAA
ATGAGACTCGCTACACAGTGTCAAAAGTGGAATTCAATTTTCTCCCTTATTAAACACAAC
TGGGAAAAAACTGTTTAACAATAACTAAAAAAATAATTTTAGACCGCAGATTCCCCCCAC
CCCCTTATTTTTCTTTGACTGCCCTCTTATATTTGCCATTTACTGCAGATTCATTGTGTG
CTATATTGATGTACATTCCTTGACCTTTCATCTTTATTGGCGGTGCTTTCATTTCAAACC
GTTGTATCTCACTTTTTATTTCATTCCTAAGTTCATGACGCAATGTGACATCACAATAAA
TATTGTTTATATTGTTAAATGACGTTATTGATCACAATATCTTTTTATTGACAG
| Gene3D |
Ankyrin_rpt-contain_sf (IPR036770) - T[8-221] 2.7E-54 - T[222-394] 2.4E-32 - T[395-532] 6.3E-31 |
| PANTHER |
TRPA1/painless (IPR030288) - T[13-1008] 2.8E-260 |
| ProSiteProfiles |
Ankyrin_rpt-contain_dom (IPR020683) - T[14-502] 93.886 |
| CDD |
Ankyrin_rpt-contain_dom (IPR020683) - T[16-140] 5.92173E-31 - T[158-281] 1.15021E-26 - T[330-457] 1.75479E-30 - T[399-523] 8.14183E-28 |
| SUPERFAMILY |
Ankyrin_rpt-contain_sf (IPR036770) - T[18-307] 5.94E-57 - T[328-525] 2.62E-42 |
| ProSiteProfiles |
Ankyrin_rpt (IPR002110) - T[20-52] 10.953 - T[53-85] 10.205 - T[119-151] 9.11 - T[160-192] 10.579 - T[231-263] 12.209 - T[335-367] 11.14 - T[404-428] 12.93 - T[436-458] 9.217 - T[470-502] 11.114 |
| SMART |
Ankyrin_rpt (IPR002110) - T[20-49] 4.6E-5 - T[53-82] 0.012 - T[86-115] 2.4 - T[119-148] 13.0 - T[160-189] 0.001 - T[193-223] 0.093 - T[231-260] 0.0011 - T[264-293] 21.0 - T[335-364] 0.0022 - T[368-397] 32.0 - T[404-433] 6.3E-6 - T[436-466] 81.0 - T[470-499] 0.0071 - T[502-531] 900.0 |
| Pfam |
Ankyrin_rpt-contain_dom (IPR020683) - T[119-190] 2.7E-7 - T[198-295] 9.8E-11 - T[329-392] 2.7E-9 - T[402-460] 7.4E-12 |
| Pfam |
Ion_trans_dom (IPR005821) - T[682-886] 5.9E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRPA1_HUMAN | 35.867 % | 624 | 0 |
| ANK1_HUMAN | 27.788 % | 185 | 2.2E-47 |
| ANK3_HUMAN | 27.495 % | 177 | 5.58E-45 |