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TRANSCRIPT CARD

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  1. Clone 'cien38502'
  2. Clone 'cima816101'
  3. Transcript 'KH2012:KH.L113.1.v2....'

Transcript Model

Transcript Id

KH2012:KH.L113.1.v2.A.SL1-1

Possible name(s)

RUFY1; RUFY2; RUFY3

Location

KhL113 [7,692 / 17,370]

Sequences

Amino acid sequence

Length: 667

>KH.L113.1.v2.A.SL1-1
SCFCKSSFSKMEMSLGELTKEEEILFDDDQELDENSSLSKLEMKEDLPDVGTPDVEVRSI
DEATLNSDIRSLDEDTIEDAPQDKNPNLHPDSREQVAEENGEVGTETSAGEDRIEKDEDA
TEEGRLDPNVQDSVMKEEKKEEEVEKEEEDIPKKMGENEGKKEAEAEEKKKEEEQVEEKS
DSDASKERGSSVSFPAIFSTSLQSIRSTLTRKSLSKESSVPTSNTDDLVNDTKEEEKKNN
GKKSMKVERRSLLGMAKLSVKGLIESSLSAGHTLDSDHVPLQQFFVIIEYVLRQGLKAPK
NFFMPNKYFWPPLEAIEKFNSEASEITSSVRSLPGIRTHLGKGRAWLRLALMQKKLADYF
KILIDNKAILSEWYDDGALIMNDEATVLAGHLVGLNCIDANLCMKGDDLDNQEMVIDYSL
YMKDGNHGNHGMFMEDDNVEDEESQMQKLMDQKNYLEERNRHLEDASVDLQKRSDHLEEE
NKSMLLEVEALKIQITELKNERVKMMDEKKDMTVTHQKTLEIREKDLDTERETLRKSKAG
LDEMYTQIQKQLKHETQMRMEVEKELELQMSLKSELDVAMKLLEKDIFAKQDGLVTLREQ
LDNVKAINMDVYNKLQAKSILEEEKNKTIAKLENETRSLAKKVSTLQQHVKKKQAKNEKS
RIDLVWI

Nucleotide sequence

Length: 2,712

>KH2012:KH.L113.1.v2.A.SL1-1
TCATGTTTCTGTAAGTCATCATTCTCTAAAATGGAGATGTCACTCGGTGAATTGACAAAA
GAAGAAGAGATTTTGTTTGACGATGATCAGGAACTGGATGAAAATTCGAGCCTGAGCAAA
TTGGAGATGAAAGAAGATCTTCCGGATGTTGGGACTCCGGATGTGGAGGTGAGGAGCATC
GACGAAGCGACGCTCAACTCTGATATTAGGAGTTTGGATGAAGATACCATAGAAGATGCC
CCTCAGGATAAAAATCCCAACTTGCATCCGGACTCTAGGGAGCAAGTGGCGGAGGAAAAC
GGAGAGGTTGGTACCGAGACTTCTGCTGGCGAAGATCGGATTGAGAAAGATGAAGATGCA
ACCGAGGAAGGAAGACTTGATCCCAATGTTCAAGATTCTGTGATGAAAGAAGAGAAAAAG
GAAGAAGAGGTGGAGAAAGAGGAGGAAGATATTCCTAAAAAAATGGGAGAGAATGAAGGA
AAAAAAGAGGCAGAGGCAGAAGAAAAGAAAAAAGAAGAAGAACAGGTTGAAGAAAAATCT
GATTCGGATGCAAGTAAAGAAAGAGGAAGTAGCGTGAGCTTCCCAGCAATCTTTTCAACA
TCATTACAAAGTATCAGGTCAACTTTAACTCGGAAATCTTTGTCAAAAGAATCATCTGTT
CCTACTTCAAATACAGATGATCTTGTGAACGATACAAAAGAAGAAGAAAAGAAAAATAAT
GGAAAGAAATCAATGAAAGTTGAAAGGAGAAGTTTATTGGGAATGGCAAAACTGAGTGTA
AAAGGTCTCATTGAATCTTCTCTCTCAGCCGGCCATACATTAGATAGCGACCATGTTCCA
CTTCAACAATTCTTTGTTATCATTGAGTATGTTCTACGGCAAGGCCTTAAAGCCCCAAAG
AATTTCTTCATGCCCAACAAATACTTCTGGCCACCTCTTGAAGCGATCGAGAAATTCAAT
TCTGAAGCTTCGGAAATAACCAGTAGTGTCCGTAGCTTGCCTGGCATTCGCACACATCTT
GGCAAGGGTCGTGCATGGTTAAGGCTTGCTCTCATGCAGAAGAAACTTGCGGATTATTTC
AAGATTCTAATTGATAACAAGGCTATTCTAAGCGAATGGTATGATGACGGTGCGTTGATA
ATGAATGACGAAGCTACAGTCCTTGCTGGTCATCTCGTTGGATTGAATTGTATCGACGCG
AATCTTTGCATGAAAGGTGATGACTTGGACAACCAGGAGATGGTGATAGATTACAGTTTG
TACATGAAAGATGGTAACCATGGTAACCATGGGATGTTCATGGAGGATGATAATGTTGAA
GATGAAGAATCACAGATGCAGAAGTTGATGGATCAGAAGAATTACCTGGAGGAGAGAAAC
AGGCACTTGGAAGATGCATCAGTTGACCTTCAGAAGAGGAGTGATCATTTGGAGGAAGAG
AACAAATCCATGCTATTGGAGGTTGAAGCTCTCAAGATCCAGATCACTGAGTTGAAGAAC
GAACGAGTGAAAATGATGGATGAGAAGAAAGATATGACGGTCACACATCAGAAAACTTTG
GAGATTCGTGAGAAAGATTTAGACACCGAACGTGAAACGCTTCGTAAATCGAAAGCTGGT
TTGGACGAAATGTACACGCAGATACAAAAGCAACTAAAGCACGAAACACAGATGAGAATG
GAAGTTGAAAAGGAATTAGAACTTCAGATGAGCCTCAAAAGTGAGCTGGATGTTGCCATG
AAACTGTTGGAAAAAGATATTTTTGCCAAACAGGATGGTTTAGTTACATTACGCGAGCAA
CTGGATAATGTCAAAGCCATCAACATGGACGTATACAATAAGTTACAGGCAAAGTCGATC
TTGGAGGAAGAGAAAAACAAAACCATTGCCAAGTTAGAAAACGAAACAAGATCTTTGGCT
AAAAAAGTTTCCACACTTCAACAACATGTCAAAAAGAAGCAGGCTAAAAATGAGAAAAGC
AGAATAGATTTAGTTTGGATATAAACTCTGCGTTTATAAGAGTGCTTGTATAATTGCTCG
GATTGTTGTTGTTGTTGTTGTTTTGTAACTTTTTAGAATTCCCATTTCCAATCAAACGCC
TTCATTGTCATACAGTGAATGTCAAACAAATTATTTATTATTTGGTTCAAACTCCCCACA
AATTCGAAATCATTTTTATCCATAATATAAAATTTTGTTATATTTTTACATTTCTTTTTT
GTTTTTTAGTTGTTTATTCTCCTTTCTCTTTGTAATAATGAACTGAACTGGTGATGCTTT
GGTACACGGCAATTTAAAGCTACAGTGTAAAACAGGGCTTCACAAACTTTTTGGCTTGCA
ACCCTTTCTACTGAACTTGTTCTAGAACCTTCATGGTTAATAATATAAAATATGCTTTGT
GTATGGTTGGTATATTCTTGGCTACAAATGTAATATACTGATATAATAACAAGATAATAT
ATAATGGCGAACTTACGGGAATTCCTGAAGTTTGTTACCCCCAGTTTAGGAAGCCTTGAT
TTAACGAATGGACAAATATTTTACGGATTTTTAACAACTAGTCATATTTGTATATATGGC
TTAAAATCTTGGGCTTAAAATCTTGAAATTGTGGTTTTGAATTGGCGGTGGTACCTGTAT
TTAATATTGCAGTGTGCAATATGTTTCTAACTTTGCTTGGTTGAACTTCACGTAAATATA
TTCTGCTACTTG

InterProScan

SUPERFAMILY
Run_dom_sf (IPR037213) - T[247-411] 4.18E-49
ProSiteProfiles
Run_dom (IPR004012) - T[275-407] 28.066
Pfam
Run_dom (IPR004012) - T[283-405] 1.6E-27
SMART
Run_dom (IPR004012) - T[343-405] 2.7E-21

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RUFY2_HUMAN 48.768 % 380 5.24E-124
RUFY1_HUMAN 46.572 % 347 6.44E-110
RUFY3_HUMAN 45.238 % 354 1.4E-115