- Transcript 'KH2012:KH.C7.402.v1....' >
- Transcript 'KH2012:KH.L116.19.v1...'
Transcript Model
Transcript Id
KH2012:KH.L116.19.v1.A.nonSL4-1
Possible name(s)
RPS27A; UBB; UBC
Gene model
Location
KhL116 [337,089 / 342,619]
Amino acid sequence
Length: 781
>KH.L116.19.v1.A.nonSL4-1
RTYIYETRFILPLQELIYYKMQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSID
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEAS
DSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
STLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKIQD
KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
VEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
I
Nucleotide sequence
Length: 2,610
>KH2012:KH.L116.19.v1.A.nonSL4-1
TCATACCCGTTAAGCTAGTGATTATATTGAAGAACTTATATTTACGAAACGCGTTTTATT
CTGCCGTTGCAAGAATTAATATATTACAAAATGCAGATCTTTGTGAAAACTTTGACTGGA
AAGACCATAACTCTTGAAGTTGAGGCATCTGACTCTATTGACAATGTCAAGGCTAAGATC
CAAGACAAAGAAGGAATCCCACCAGATCAGCAACGTCTTATCTTCGCTGGTAAGCAGCTT
GAAGATGGACGCACACTGAGCGATTACAACATCCAGAAAGAGTCTACTCTTCACTTGGTT
CTTCGTCTCAGAGGAGGAATGCAAATCTTTGTCAAAACTTTGACAGGAAAGACCATCACT
CTTGAAGTTGAGGCATCTGACTCTATTGACAACGTCAAAGCCAAGATCCAAGACAAAGAA
GGAATTCCACCAGATCAGCAACGTCTTATCTTCGCTGGTAAGCAGCTTGAAGATGGACGT
ACACTGAGCGATTACAACATCCAGAAAGAGTCTACTCTTCACTTGGTTCTTCGTCTCAGA
GGAGGAATGCAAATCTTTGTCAAAACTTTGACAGGAAAGACTATCACTCTTGAAGTTGAG
GCTTCTGATTCTATTGACAACGTCAAAGCTAAGATTCAAGACAAAGAAGGAATCCCCCCA
GATCAGCAACGTCTTATCTTCGCTGGTAAGCAGCTTGAAGATGGACGTACACTGAGCGAT
TACAACATCCAAAAAGAGTCTACTCTTCACTTGGTTCTTCGTCTCAGAGGAGGAATGCAA
ATCTTTGTCAAAACTTTGACAGGAAAGACTATCACTCTTGAAGTTGAGGCTTCTGATTCT
ATTGACAACGTCAAAGCTAAGATTCAAGACAAAGAAGGAATCCCCCCAGATCAGCAACGT
CTTATCTTCGCTGGTAAGCAGCTTGAAGACGGACGCACACTGAGCGATTACAACATCCAG
AAAGAGTCTACTCTTCACTTAGTTCTTCGTCTCAGAGGAGGAATGCAAATCTTTGTCAAA
ACTTTGACTGGAAAGACCATCACTCTTGAAGTTGAGGCATCTGACTCTATTGACAACGTC
AAGGCTAAGATCCAAGACAAAGAAGGAATTCCCCCAGATCAACAACGTCTTATCTTCGCT
GGTAAGCAGCTTGAAGACGGACGCACACTGAGCGATTACAACATCCAGAAAGAGTCCACT
CTTCACTTGGTTCTTCGTCTCAGAGGAGGAATGCAAATCTTTGTCAAAACTTTGACAGGA
AAAACCATCACCCTTGAAGTTGAGGCATCTGATTCCATTGACAATGTCAAAGCCAAGATC
CAAGACAAAGAAGGAATCCCCCCAGATCAGCAACGTCTTATCTTCGCTGGTAAGCAGCTT
GAAGACGGACGCACACTGAGCGATTACAACATCCAGAAAGAGTCCACTCTTCACTTGGTT
CTTCGTCTCAGAGGAGGAATGCAAATCTTTGTCAAAACTTTGACTGGAAAAACCATCACT
CTTGAAGTTGAGGCATCTGATTCTATTGACAATGTCAAAGCCAAGATCCAAGACAAAGAA
GGAATCCCCCCAGATCAGCAACGTCTTATCTTCGCTGGTAAGCAGCTTGAAGACGGACGT
ACACTGAGCGATTACAACATCCAAAAAGAGTCTACTCTTCACTTGGTTCTTCGTCTTAGA
GGAGGAATGCAAATTTTTGTCAAAACTTTGACTGGAAAGACCATCACTCTTGAAGTTGAG
GCATCTGACTCTATTGACAACGTCAAAGCCAAGATCCAAGACAAAGAAGGAATCCCTCCA
GATCAGCAACGTCTTATCTTCGCTGGTAAGCAGCTTGAAGACGGACGCACACTGAGCGAT
TACAACATCCAAAAAGAGTCTACTCTTCACTTGGTTCTTCGTCTTAGAGGAGGAATGCAA
ATTTTTGTCAAAACTTTGACTGGAAAGACCATCACTCTTGAAGTTGAGGCATCTGACTCT
ATTGACAACGTCAAAGCCAAGATCCAAGACAAAGAAGGAATCCCTCCAGATCAGCAACGT
CTTATCTTCGCTGGTAAGCAGCTTGAAGACGGACGCACACTGAGCGATTACAACATCCAA
AAAGAGTCTACTCTTCACTTGGTTCTTCGTCTCAGAGGAGGAATGCAAATCTTTGTCAAA
ACTTTGACTGGAAAAACCATCACTCTTGAAGTTGAGGCATCTGACTCTATTGACAATGTC
AAAGCCAAGATTCAAGACAAAGAAGGAATCCCCCCAGATCAGCAACGTCTTATCTTTGCT
GGTAAGCAGCTTGAAGACGGACGCACACTGAGCGATTACAACATCCAGAAGGAGTCTACT
CTTCACTTGGTTCTTCGTCTCAGAGGAGGAATCTAATCCATCAATGCAACTGTACATCAT
TCATAAACTTTGTCTTAAATTCCAAACTGCTATTAAATAACATAACTTTAACAGGTTTGG
CGAAAAACTAGACCCTCGTAAATTAAACAGTCGTTTTTCTTGCCTCTGTAGAGTTAAGAT
TTTACTGTGCCTGGTGTAATACAGAGTAATAAAGTTTAAAATTCCAAAGATGACGCTTAT
AAACAAACAAATAAAATGTAATGTCCATTA
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[19-96] 5.4E-33 - T[96-172] 8.42E-33 - T[172-248] 1.17E-32 - T[248-324] 8.42E-33 - T[324-400] 8.42E-33 - T[400-476] 8.42E-33 - T[475-552] 6.48E-33 - T[552-628] 1.17E-32 - T[628-704] 8.42E-33 - T[704-780] 1.3E-32 |
| ProSiteProfiles |
Ubiquitin_dom (IPR000626) - T[21-96] 30.213 - T[97-172] 30.213 - T[173-248] 30.213 - T[249-324] 30.213 - T[325-400] 30.213 - T[401-476] 30.213 - T[477-552] 30.213 - T[553-628] 30.213 - T[629-704] 30.213 - T[705-780] 30.213 |
| SMART |
Ubiquitin_dom (IPR000626) - T[21-92] 2.0E-34 - T[97-168] 2.0E-34 - T[173-244] 2.0E-34 - T[249-320] 2.0E-34 - T[325-396] 2.0E-34 - T[401-472] 2.0E-34 - T[477-548] 2.0E-34 - T[553-624] 2.0E-34 - T[629-700] 2.0E-34 - T[705-776] 2.0E-34 |
| Pfam |
Ubiquitin_dom (IPR000626) - T[23-94] 6.0E-32 - T[99-170] 6.0E-32 - T[175-246] 6.0E-32 - T[251-322] 6.0E-32 - T[327-398] 6.0E-32 - T[403-474] 6.0E-32 - T[479-550] 6.0E-32 - T[555-626] 6.0E-32 - T[631-702] 6.0E-32 - T[707-778] 6.0E-32 |
| PRINTS |
Ubiquitin (IPR019956) - T[31-51] 1.7E-36 - T[52-72] 1.7E-36 - T[73-94] 1.7E-36 |
| ProSitePatterns |
Ubiquitin_CS (IPR019954) - T[47-72] . - T[123-148] . - T[199-224] . - T[275-300] . - T[351-376] . - T[427-452] . - T[503-528] . - T[579-604] . - T[655-680] . - T[731-756] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RL40_HUMAN | 96.104 % | 153 | 1.24E-43 |
| UBB_HUMAN | 95.633 % | 439 | 1.29E-150 |
| UBC_HUMAN | 95.912 % | 1306 | 0 |