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- Transcript 'KH2012:KH.L116.19.v2...'
Transcript Model
Transcript Id
KH2012:KH.L116.19.v2.A.SL3-1
Possible name(s)
RPS27A; UBB; UBC
Gene model
Location
KhL116 [337,089 / 342,311]
Amino acid sequence
Length: 761
>KH.L116.19.v2.A.SL3-1
MQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSID
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI
Nucleotide sequence
Length: 2,521
>KH2012:KH.L116.19.v2.A.SL3-1
AATGCAGATCTTTGTGAAAACTTTGACTGGAAAGACCATAACTCTTGAAGTTGAGGCATC
TGACTCTATTGACAATGTCAAGGCTAAGATCCAAGACAAAGAAGGAATCCCACCAGATCA
GCAACGTCTTATCTTCGCTGGTAAGCAGCTTGAAGATGGACGCACACTGAGCGATTACAA
CATCCAGAAAGAGTCTACTCTTCACTTGGTTCTTCGTCTCAGAGGAGGAATGCAAATCTT
TGTCAAAACTTTGACAGGAAAGACCATCACTCTTGAAGTTGAGGCATCTGACTCTATTGA
CAACGTCAAAGCCAAGATCCAAGACAAAGAAGGAATTCCACCAGATCAGCAACGTCTTAT
CTTCGCTGGTAAGCAGCTTGAAGATGGACGTACACTGAGCGATTACAACATCCAGAAAGA
GTCTACTCTTCACTTGGTTCTTCGTCTCAGAGGAGGAATGCAAATCTTTGTCAAAACTTT
GACAGGAAAGACTATCACTCTTGAAGTTGAGGCTTCTGATTCTATTGACAACGTCAAAGC
TAAGATTCAAGACAAAGAAGGAATCCCCCCAGATCAGCAACGTCTTATCTTCGCTGGTAA
GCAGCTTGAAGATGGACGTACACTGAGCGATTACAACATCCAAAAAGAGTCTACTCTTCA
CTTGGTTCTTCGTCTCAGAGGAGGAATGCAAATCTTTGTCAAAACTTTGACAGGAAAGAC
TATCACTCTTGAAGTTGAGGCTTCTGATTCTATTGACAACGTCAAAGCTAAGATTCAAGA
CAAAGAAGGAATCCCCCCAGATCAGCAACGTCTTATCTTCGCTGGTAAGCAGCTTGAAGA
CGGACGCACACTGAGCGATTACAACATCCAGAAAGAGTCTACTCTTCACTTAGTTCTTCG
TCTCAGAGGAGGAATGCAAATCTTTGTCAAAACTTTGACTGGAAAGACCATCACTCTTGA
AGTTGAGGCATCTGACTCTATTGACAACGTCAAGGCTAAGATCCAAGACAAAGAAGGAAT
TCCCCCAGATCAACAACGTCTTATCTTCGCTGGTAAGCAGCTTGAAGACGGACGCACACT
GAGCGATTACAACATCCAGAAAGAGTCCACTCTTCACTTGGTTCTTCGTCTCAGAGGAGG
AATGCAAATCTTTGTCAAAACTTTGACAGGAAAAACCATCACCCTTGAAGTTGAGGCATC
TGATTCCATTGACAATGTCAAAGCCAAGATCCAAGACAAAGAAGGAATCCCCCCAGATCA
GCAACGTCTTATCTTCGCTGGTAAGCAGCTTGAAGACGGACGCACACTGAGCGATTACAA
CATCCAGAAAGAGTCCACTCTTCACTTGGTTCTTCGTCTCAGAGGAGGAATGCAAATCTT
TGTCAAAACTTTGACTGGAAAAACCATCACTCTTGAAGTTGAGGCATCTGATTCTATTGA
CAATGTCAAAGCCAAGATCCAAGACAAAGAAGGAATCCCCCCAGATCAGCAACGTCTTAT
CTTCGCTGGTAAGCAGCTTGAAGACGGACGTACACTGAGCGATTACAACATCCAAAAAGA
GTCTACTCTTCACTTGGTTCTTCGTCTTAGAGGAGGAATGCAAATTTTTGTCAAAACTTT
GACTGGAAAGACCATCACTCTTGAAGTTGAGGCATCTGACTCTATTGACAACGTCAAAGC
CAAGATCCAAGACAAAGAAGGAATCCCTCCAGATCAGCAACGTCTTATCTTCGCTGGTAA
GCAGCTTGAAGACGGACGCACACTGAGCGATTACAACATCCAAAAAGAGTCTACTCTTCA
CTTGGTTCTTCGTCTTAGAGGAGGAATGCAAATTTTTGTCAAAACTTTGACTGGAAAGAC
CATCACTCTTGAAGTTGAGGCATCTGACTCTATTGACAACGTCAAAGCCAAGATCCAAGA
CAAAGAAGGAATCCCTCCAGATCAGCAACGTCTTATCTTCGCTGGTAAGCAGCTTGAAGA
CGGACGCACACTGAGCGATTACAACATCCAAAAAGAGTCTACTCTTCACTTGGTTCTTCG
TCTCAGAGGAGGAATGCAAATCTTTGTCAAAACTTTGACTGGAAAAACCATCACTCTTGA
AGTTGAGGCATCTGACTCTATTGACAATGTCAAAGCCAAGATTCAAGACAAAGAAGGAAT
CCCCCCAGATCAGCAACGTCTTATCTTTGCTGGTAAGCAGCTTGAAGACGGACGCACACT
GAGCGATTACAACATCCAGAAGGAGTCTACTCTTCACTTGGTTCTTCGTCTCAGAGGAGG
AATCTAATCCATCAATGCAACTGTACATCATTCATAAACTTTGTCTTAAATTCCAAACTG
CTATTAAATAACATAACTTTAACAGGTTTGGCGAAAAACTAGACCCTCGTAAATTAAACA
GTCGTTTTTCTTGCCTCTGTAGAGTTAAGATTTTACTGTGCCTGGTGTAATACAGAGTAA
TAAAGTTTAAAATTCCAAAGATGACGCTTATAAACAAACAAATAAAATGTAATGTCCATT
A
| ProSiteProfiles |
Ubiquitin_dom (IPR000626) - T[1-76] 30.213 - T[77-152] 30.213 - T[153-228] 30.213 - T[229-304] 30.213 - T[305-380] 30.213 - T[381-456] 30.213 - T[457-532] 30.213 - T[533-608] 30.213 - T[609-684] 30.213 - T[685-760] 30.213 |
| SMART |
Ubiquitin_dom (IPR000626) - T[1-72] 2.0E-34 - T[77-148] 2.0E-34 - T[153-224] 2.0E-34 - T[229-300] 2.0E-34 - T[305-376] 2.0E-34 - T[381-452] 2.0E-34 - T[457-528] 2.0E-34 - T[533-604] 2.0E-34 - T[609-680] 2.0E-34 - T[685-756] 2.0E-34 |
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[1-76] 2.81E-32 - T[76-152] 1.12E-32 - T[152-228] 8.2E-33 - T[229-304] 1.64E-32 - T[304-380] 1.12E-32 - T[380-456] 1.12E-32 - T[456-532] 8.2E-33 - T[531-608] 6.26E-33 - T[608-684] 8.2E-33 - T[683-760] 6.91E-33 |
| Pfam |
Ubiquitin_dom (IPR000626) - T[3-74] 5.8E-32 - T[79-150] 5.8E-32 - T[155-226] 5.8E-32 - T[231-302] 5.8E-32 - T[307-378] 5.8E-32 - T[383-454] 5.8E-32 - T[459-530] 5.8E-32 - T[535-606] 5.8E-32 - T[611-682] 5.8E-32 - T[687-758] 5.8E-32 |
| PRINTS |
Ubiquitin (IPR019956) - T[11-31] 1.4E-36 - T[32-52] 1.4E-36 - T[53-74] 1.4E-36 |
| ProSitePatterns |
Ubiquitin_CS (IPR019954) - T[27-52] . - T[103-128] . - T[179-204] . - T[255-280] . - T[331-356] . - T[407-432] . - T[483-508] . - T[559-584] . - T[635-660] . - T[711-736] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RL40_HUMAN | 96.104 % | 153 | 1.02E-43 |
| UBB_HUMAN | 95.633 % | 439 | 5.36E-151 |
| UBC_HUMAN | 95.912 % | 1307 | 0 |