- Transcript 'Moocci.CG.ELv1_2.S64...' >
- Clone 'cign064g21' >
- Transcript 'Phmamm.CG.MTP2014.S8...' >
- Transcript 'Phfumi.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.L116.36.v1...'
Transcript Model
Transcript Id
KH2012:KH.L116.36.v1.A.ND3-1
Possible name(s)
NVL; SPATA5; VCP
Gene model
Location
KhL116 [715,672 / 723,208]
Amino acid sequence
Length: 764
>KH.L116.36.v1.A.ND3-1
SLSFDRALPGRIKKYVETHSGFVDVQFMADCLYKQYRFDYGRRKLNPFRKLVGKVYADLL
KTEEIQNNLPPSSETSDDEKVLVEYKDSNTMNNSLHAIYNNVSLVKSPKPPSLSPQNYEQ
INQSLLPDDTKDENLTINQDSAGSNANVTQHNLVTNEDRLKENKKKLRRKRSKMEQNKKN
LKKLKTDPNDSDDFHSPNKKKFSFIDSQVSFVDVAGNQDALNELARLLLHMCHPEVYSAL
GVSPPRGILLHGPPGCGKTLLGNAIAGQLGIPLLRLVGPELIGGVSGESEQRIRDVFEIA
QQTAPCVLFLDEVDVIAQRRENSSKDMERRVVAQLLSCLDDFNKDSQQVLVVGATNRPEV
LDPALRRSGRFDREIMLGIPDESAREKILKVLSQKMKLSDDVNFGLIARLTPGFVGADIL
SLCREAAMQTVARVLNINKTNTVTDEQLELMAIETSDFEEALCVVQPSSKREGFATVPDV
TWDDVGALTDVREELSIAILGPVRNPMAFASLGLSRASGVLLAGPPGCGKTLLAKAIANE
SGINFISVKGPELLNMYVGESERAVRQCFERARNSAPCVVFFDELDSLCPRRTSAESGAS
ARVVNQMLTELDGLESRKQVFVVAATNRPDIIDPAILRPGRLDKVLYVGIPTTEDRIQIL
RTITKNGKKPLLDEAVCLSNLGADDRCSGFTGADLSALMREASLDAIRGSVNHGWNVVLP
QSDNNFHSIKITLVNINAAFKKVKPSVSEQDRLLYEEMKRKFTK
Nucleotide sequence
Length: 2,303
>KH2012:KH.L116.36.v1.A.ND3-1
TGTCGCTCAGTTTTGATAGAGCATTGCCAGGAAGAATTAAAAAGTATGTGGAGACTCACA
GTGGATTTGTGGATGTACAATTCATGGCTGACTGTTTGTATAAACAATACAGATTTGATT
ATGGGAGAAGAAAATTGAATCCATTTAGAAAGTTGGTTGGGAAAGTTTATGCCGATTTGT
TAAAGACAGAAGAAATTCAAAACAATTTACCTCCCAGCTCAGAAACATCAGATGATGAAA
AGGTGTTGGTGGAATACAAGGATAGCAACACAATGAACAACTCACTTCACGCCATTTACA
ACAATGTTAGCCTAGTTAAATCACCCAAACCTCCAAGTTTATCTCCTCAAAACTATGAAC
AAATCAATCAAAGTTTACTTCCAGATGATACAAAAGATGAAAACTTAACAATCAACCAAG
ACTCAGCTGGTAGCAATGCAAATGTTACTCAGCACAATTTGGTCACAAACGAAGACCGCT
TAAAAGAAAATAAAAAAAAACTTAGAAGAAAGCGATCAAAAATGGAACAAAATAAAAAAA
ATTTAAAGAAATTGAAGACCGACCCAAATGACTCGGATGACTTCCATTCACCAAATAAAA
AGAAATTTTCATTTATAGATTCTCAAGTTTCATTTGTTGATGTTGCAGGAAACCAAGATG
CATTGAATGAACTCGCTCGTCTCTTACTTCACATGTGTCATCCCGAGGTCTATTCAGCCC
TGGGTGTTTCCCCTCCACGTGGTATTTTATTACATGGACCTCCAGGTTGTGGAAAAACTT
TACTTGGTAACGCCATAGCTGGTCAGTTAGGGATTCCTCTGTTACGCTTGGTTGGTCCGG
AGTTAATTGGAGGTGTTTCGGGTGAAAGTGAACAGCGTATTCGTGATGTTTTTGAGATCG
CTCAACAAACAGCTCCATGTGTTTTATTTCTGGATGAAGTTGATGTCATCGCGCAACGAA
GAGAAAATTCATCAAAAGACATGGAGCGAAGAGTAGTCGCGCAACTTTTGTCATGCTTGG
ATGATTTTAACAAAGATAGTCAACAAGTGTTGGTCGTCGGGGCAACCAATCGTCCTGAAG
TTCTTGATCCAGCTCTTCGAAGATCTGGAAGGTTTGATCGTGAGATTATGTTGGGCATTC
CCGATGAATCAGCCAGAGAAAAAATATTGAAAGTTCTTAGTCAAAAAATGAAATTATCTG
ATGACGTCAATTTTGGTTTGATTGCTCGTTTAACTCCCGGATTTGTCGGAGCTGATATAC
TATCTCTATGTCGTGAAGCTGCAATGCAAACAGTCGCTCGTGTTCTTAACATAAATAAAA
CAAACACAGTAACTGATGAACAATTGGAATTGATGGCGATTGAAACAAGTGATTTCGAAG
AAGCGTTGTGTGTCGTGCAACCTTCATCAAAACGTGAAGGATTTGCGACAGTTCCTGATG
TGACATGGGATGATGTTGGTGCACTGACCGATGTTAGAGAAGAACTTTCCATTGCGATAT
TGGGCCCAGTTAGAAACCCGATGGCGTTTGCATCACTTGGATTGTCGAGAGCATCCGGAG
TATTATTAGCTGGTCCTCCAGGCTGCGGAAAAACTCTGCTCGCAAAAGCGATCGCCAACG
AATCTGGGATAAATTTTATTTCAGTGAAAGGACCTGAGCTTCTCAACATGTATGTTGGTG
AAAGTGAACGAGCTGTAAGGCAATGTTTTGAACGAGCGAGGAATTCTGCTCCTTGTGTGG
TCTTCTTTGATGAACTTGATTCACTTTGTCCTCGAAGGACATCGGCCGAGAGTGGAGCAA
GTGCAAGAGTGGTCAATCAAATGTTAACCGAACTTGATGGCCTGGAATCAAGAAAACAAG
TTTTTGTTGTTGCTGCGACCAACAGACCCGATATTATTGATCCAGCGATACTCAGGCCTG
GTCGACTAGATAAAGTACTTTACGTTGGAATTCCAACCACGGAGGATAGAATTCAAATAT
TAAGAACAATAACAAAGAATGGAAAGAAACCTCTTCTTGATGAAGCTGTCTGTTTGTCCA
ACCTCGGTGCTGATGATCGTTGTAGCGGATTTACAGGGGCTGATTTGTCTGCACTCATGC
GTGAAGCATCATTAGATGCAATCCGTGGGAGCGTCAACCATGGTTGGAATGTTGTTTTGC
CACAAAGTGATAATAATTTCCATTCAATAAAGATAACCTTGGTAAATATTAATGCTGCTT
TCAAGAAAGTCAAACCATCAGTTAGTGAACAGGATCGTTTATTATACGAAGAAATGAAAC
GAAAGTTTACAAAATAAAAACAA
| Gene3D |
NLV2_N_sf (IPR038100) - T[1-67] 3.8E-14 |
| Pfam |
NVL2_nucleolin-bd (IPR031996) - T[5-63] 1.6E-15 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[209-472] 1.1E-59 - T[478-760] 2.7E-63 |
| SMART |
AAA+_ATPase (IPR003593) - T[244-381] 3.4E-23 - T[516-652] 3.4E-22 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[248-377] 7.3E-42 - T[520-649] 1.5E-47 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[349-367] . - T[620-638] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPAT5_HUMAN | 36.422 % | 395 | 3.98E-125 |
| TERA_HUMAN | 46.414 % | 463 | 3.22E-152 |
| NVL_HUMAN | 47.141 % | 730 | 0 |