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- Transcript 'KH2012:KH.L116.36.v2...'
Transcript Model
Transcript Id
KH2012:KH.L116.36.v2.A.ND2-1
Possible name(s)
NVL; SPATA5; VCP
Gene model
Location
KhL116 [715,672 / 721,705]
Amino acid sequence
Length: 713
>KH.L116.36.v2.A.ND2-1
MFLVYADLLKTEEIQNNLPPSSETSDDEKVLVEYKDSNTMNNSLHAIYNNVSLVKSPKPP
SLSPQNYEQINQSLLPDDTKDENLTINQDSAGSNANVTQHNLVTNEDRLKENKKKLRRKR
SKMEQNKKNLKKLKTDPNDSDDFHSPNKKKFSFIDSQVSFVDVAGNQDALNELARLLLHM
CHPEVYSALGVSPPRGILLHGPPGCGKTLLGNAIAGQLGIPLLRLVGPELIGGVSGESEQ
RIRDVFEIAQQTAPCVLFLDEVDVIAQRRENSSKDMERRVVAQLLSCLDDFNKDSQQVLV
VGATNRPEVLDPALRRSGRFDREIMLGIPDESAREKILKVLSQKMKLSDDVNFGLIARLT
PGFVGADILSLCREAAMQTVARVLNINKTNTVTDEQLELMAIETSDFEEALCVVQPSSKR
EGFATVPDVTWDDVGALTDVREELSIAILGPVRNPMAFASLGLSRASGVLLAGPPGCGKT
LLAKAIANESGINFISVKGPELLNMYVGESERAVRQCFERARNSAPCVVFFDELDSLCPR
RTSAESGASARVVNQMLTELDGLESRKQVFVVAATNRPDIIDPAILRPGRLDKVLYVGIP
TTEDRIQILRTITKNGKKPLLDEAVCLSNLGADDRCSGFTGADLSALMREASLDAIRGSV
NHGWNVVLPQSDNNFHSIKITLVNINAAFKKVKPSVSEQDRLLYEEMKRKFTK
Nucleotide sequence
Length: 2,523
>KH2012:KH.L116.36.v2.A.ND2-1
AGATTTCTATTCTTGTATTAAATCAACACCAACAATCTGTTTCTCTATTTGCCATAAATG
ACGCAGTTGATCTATGTCAACTGGAGTGCAAGTTTAAACAGAAGAGCGACATGGCAACCG
CGTATCATATCAACTGTCATTTTCATGTTAATTACTTCAGATTAATATAATATTATACTC
TATCTATTATAAGATATTCACAAATACAAAGTAGTCTACATAGTCTTTACATTGTATATT
ATTCTTAATCTTAACTTAAGTCAAATTTGGCTGAGGTTTTAATAAACCTTAATCGATAGA
TCATTTTTGTTGGTTATAAATAATGGCACAATAAAAACATTTGTTTTCAATGATAAATGT
TTTTTTCAATGATAAATGTTTTTAGTTTATGCCGATTTGTTAAAGACAGAAGAAATTCAA
AACAATTTACCTCCCAGCTCAGAAACATCAGATGATGAAAAGGTGTTGGTGGAATACAAG
GATAGCAACACAATGAACAACTCACTTCACGCCATTTACAACAATGTTAGCCTAGTTAAA
TCACCCAAACCTCCAAGTTTATCTCCTCAAAACTATGAACAAATCAATCAAAGTTTACTT
CCAGATGATACAAAAGATGAAAACTTAACAATCAACCAAGACTCAGCTGGTAGCAATGCA
AATGTTACTCAGCACAATTTGGTCACAAACGAAGACCGCTTAAAAGAAAATAAAAAAAAA
CTTAGAAGAAAGCGATCAAAAATGGAACAAAATAAAAAAAATTTAAAGAAATTGAAGACC
GACCCAAATGACTCGGATGACTTCCATTCACCAAATAAAAAGAAATTTTCATTTATAGAT
TCTCAAGTTTCATTTGTTGATGTTGCAGGAAACCAAGATGCATTGAATGAACTCGCTCGT
CTCTTACTTCACATGTGTCATCCCGAGGTCTATTCAGCCCTGGGTGTTTCCCCTCCACGT
GGTATTTTATTACATGGACCTCCAGGTTGTGGAAAAACTTTACTTGGTAACGCCATAGCT
GGTCAGTTAGGGATTCCTCTGTTACGCTTGGTTGGTCCGGAGTTAATTGGAGGTGTTTCG
GGTGAAAGTGAACAGCGTATTCGTGATGTTTTTGAGATCGCTCAACAAACAGCTCCATGT
GTTTTATTTCTGGATGAAGTTGATGTCATCGCGCAACGAAGAGAAAATTCATCAAAAGAC
ATGGAGCGAAGAGTAGTCGCGCAACTTTTGTCATGCTTGGATGATTTTAACAAAGATAGT
CAACAAGTGTTGGTCGTCGGGGCAACCAATCGTCCTGAAGTTCTTGATCCAGCTCTTCGA
AGATCTGGAAGGTTTGATCGTGAGATTATGTTGGGCATTCCCGATGAATCAGCCAGAGAA
AAAATATTGAAAGTTCTTAGTCAAAAAATGAAATTATCTGATGACGTCAATTTTGGTTTG
ATTGCTCGTTTAACTCCCGGATTTGTCGGAGCTGATATACTATCTCTATGTCGTGAAGCT
GCAATGCAAACAGTCGCTCGTGTTCTTAACATAAATAAAACAAACACAGTAACTGATGAA
CAATTGGAATTGATGGCGATTGAAACAAGTGATTTCGAAGAAGCGTTGTGTGTCGTGCAA
CCTTCATCAAAACGTGAAGGATTTGCGACAGTTCCTGATGTGACATGGGATGATGTTGGT
GCACTGACCGATGTTAGAGAAGAACTTTCCATTGCGATATTGGGCCCAGTTAGAAACCCG
ATGGCGTTTGCATCACTTGGATTGTCGAGAGCATCCGGAGTATTATTAGCTGGTCCTCCA
GGCTGCGGAAAAACTCTGCTCGCAAAAGCGATCGCCAACGAATCTGGGATAAATTTTATT
TCAGTGAAAGGACCTGAGCTTCTCAACATGTATGTTGGTGAAAGTGAACGAGCTGTAAGG
CAATGTTTTGAACGAGCGAGGAATTCTGCTCCTTGTGTGGTCTTCTTTGATGAACTTGAT
TCACTTTGTCCTCGAAGGACATCGGCCGAGAGTGGAGCAAGTGCAAGAGTGGTCAATCAA
ATGTTAACCGAACTTGATGGCCTGGAATCAAGAAAACAAGTTTTTGTTGTTGCTGCGACC
AACAGACCCGATATTATTGATCCAGCGATACTCAGGCCTGGTCGACTAGATAAAGTACTT
TACGTTGGAATTCCAACCACGGAGGATAGAATTCAAATATTAAGAACAATAACAAAGAAT
GGAAAGAAACCTCTTCTTGATGAAGCTGTCTGTTTGTCCAACCTCGGTGCTGATGATCGT
TGTAGCGGATTTACAGGGGCTGATTTGTCTGCACTCATGCGTGAAGCATCATTAGATGCA
ATCCGTGGGAGCGTCAACCATGGTTGGAATGTTGTTTTGCCACAAAGTGATAATAATTTC
CATTCAATAAAGATAACCTTGGTAAATATTAATGCTGCTTTCAAGAAAGTCAAACCATCA
GTTAGTGAACAGGATCGTTTATTATACGAAGAAATGAAACGAAAGTTTACAAAATAAAAA
CAA
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[158-421] 9.21E-60 - T[427-709] 2.33E-63 |
| SMART |
AAA+_ATPase (IPR003593) - T[193-330] 3.4E-23 - T[465-601] 3.4E-22 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[197-326] 6.5E-42 - T[469-598] 1.4E-47 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[298-316] . - T[569-587] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPAT5_HUMAN | 36.422 % | 396 | 3.75E-126 |
| TERA_HUMAN | 46.414 % | 464 | 3.89E-153 |
| NVL_HUMAN | 56.393 % | 708 | 0 |