- Transcript 'KH2012:KH.C14.386.v1...' >
- Clone 'cicl047k24' >
- Transcript 'KH2012:KH.C10.491.v1...' >
- Clone 'cien80214' >
- Transcript 'KH2012:KH.L116.36.v2...'
Transcript Model
Transcript Id
KH2012:KH.L116.36.v2.A.SL1-1
Possible name(s)
NVL; SPATA5; VCP
Gene model
Location
KhL116 [715,672 / 721,320]
Amino acid sequence
Length: 709
>KH.L116.36.v2.A.SL1-1
YADLLKTEEIQNNLPPSSETSDDEKVLVEYKDSNTMNNSLHAIYNNVSLVKSPKPPSLSP
QNYEQINQSLLPDDTKDENLTINQDSAGSNANVTQHNLVTNEDRLKENKKKLRRKRSKME
QNKKNLKKLKTDPNDSDDFHSPNKKKFSFIDSQVSFVDVAGNQDALNELARLLLHMCHPE
VYSALGVSPPRGILLHGPPGCGKTLLGNAIAGQLGIPLLRLVGPELIGGVSGESEQRIRD
VFEIAQQTAPCVLFLDEVDVIAQRRENSSKDMERRVVAQLLSCLDDFNKDSQQVLVVGAT
NRPEVLDPALRRSGRFDREIMLGIPDESAREKILKVLSQKMKLSDDVNFGLIARLTPGFV
GADILSLCREAAMQTVARVLNINKTNTVTDEQLELMAIETSDFEEALCVVQPSSKREGFA
TVPDVTWDDVGALTDVREELSIAILGPVRNPMAFASLGLSRASGVLLAGPPGCGKTLLAK
AIANESGINFISVKGPELLNMYVGESERAVRQCFERARNSAPCVVFFDELDSLCPRRTSA
ESGASARVVNQMLTELDGLESRKQVFVVAATNRPDIIDPAILRPGRLDKVLYVGIPTTED
RIQILRTITKNGKKPLLDEAVCLSNLGADDRCSGFTGADLSALMREASLDAIRGSVNHGW
NVVLPQSDNNFHSIKITLVNINAAFKKVKPSVSEQDRLLYEEMKRKFTK
Nucleotide sequence
Length: 2,138
>KH2012:KH.L116.36.v2.A.SL1-1
TTTATGCCGATTTGTTAAAGACAGAAGAAATTCAAAACAATTTACCTCCCAGCTCAGAAA
CATCAGATGATGAAAAGGTGTTGGTGGAATACAAGGATAGCAACACAATGAACAACTCAC
TTCACGCCATTTACAACAATGTTAGCCTAGTTAAATCACCCAAACCTCCAAGTTTATCTC
CTCAAAACTATGAACAAATCAATCAAAGTTTACTTCCAGATGATACAAAAGATGAAAACT
TAACAATCAACCAAGACTCAGCTGGTAGCAATGCAAATGTTACTCAGCACAATTTGGTCA
CAAACGAAGACCGCTTAAAAGAAAATAAAAAAAAACTTAGAAGAAAGCGATCAAAAATGG
AACAAAATAAAAAAAATTTAAAGAAATTGAAGACCGACCCAAATGACTCGGATGACTTCC
ATTCACCAAATAAAAAGAAATTTTCATTTATAGATTCTCAAGTTTCATTTGTTGATGTTG
CAGGAAACCAAGATGCATTGAATGAACTCGCTCGTCTCTTACTTCACATGTGTCATCCCG
AGGTCTATTCAGCCCTGGGTGTTTCCCCTCCACGTGGTATTTTATTACATGGACCTCCAG
GTTGTGGAAAAACTTTACTTGGTAACGCCATAGCTGGTCAGTTAGGGATTCCTCTGTTAC
GCTTGGTTGGTCCGGAGTTAATTGGAGGTGTTTCGGGTGAAAGTGAACAGCGTATTCGTG
ATGTTTTTGAGATCGCTCAACAAACAGCTCCATGTGTTTTATTTCTGGATGAAGTTGATG
TCATCGCGCAACGAAGAGAAAATTCATCAAAAGACATGGAGCGAAGAGTAGTCGCGCAAC
TTTTGTCATGCTTGGATGATTTTAACAAAGATAGTCAACAAGTGTTGGTCGTCGGGGCAA
CCAATCGTCCTGAAGTTCTTGATCCAGCTCTTCGAAGATCTGGAAGGTTTGATCGTGAGA
TTATGTTGGGCATTCCCGATGAATCAGCCAGAGAAAAAATATTGAAAGTTCTTAGTCAAA
AAATGAAATTATCTGATGACGTCAATTTTGGTTTGATTGCTCGTTTAACTCCCGGATTTG
TCGGAGCTGATATACTATCTCTATGTCGTGAAGCTGCAATGCAAACAGTCGCTCGTGTTC
TTAACATAAATAAAACAAACACAGTAACTGATGAACAATTGGAATTGATGGCGATTGAAA
CAAGTGATTTCGAAGAAGCGTTGTGTGTCGTGCAACCTTCATCAAAACGTGAAGGATTTG
CGACAGTTCCTGATGTGACATGGGATGATGTTGGTGCACTGACCGATGTTAGAGAAGAAC
TTTCCATTGCGATATTGGGCCCAGTTAGAAACCCGATGGCGTTTGCATCACTTGGATTGT
CGAGAGCATCCGGAGTATTATTAGCTGGTCCTCCAGGCTGCGGAAAAACTCTGCTCGCAA
AAGCGATCGCCAACGAATCTGGGATAAATTTTATTTCAGTGAAAGGACCTGAGCTTCTCA
ACATGTATGTTGGTGAAAGTGAACGAGCTGTAAGGCAATGTTTTGAACGAGCGAGGAATT
CTGCTCCTTGTGTGGTCTTCTTTGATGAACTTGATTCACTTTGTCCTCGAAGGACATCGG
CCGAGAGTGGAGCAAGTGCAAGAGTGGTCAATCAAATGTTAACCGAACTTGATGGCCTGG
AATCAAGAAAACAAGTTTTTGTTGTTGCTGCGACCAACAGACCCGATATTATTGATCCAG
CGATACTCAGGCCTGGTCGACTAGATAAAGTACTTTACGTTGGAATTCCAACCACGGAGG
ATAGAATTCAAATATTAAGAACAATAACAAAGAATGGAAAGAAACCTCTTCTTGATGAAG
CTGTCTGTTTGTCCAACCTCGGTGCTGATGATCGTTGTAGCGGATTTACAGGGGCTGATT
TGTCTGCACTCATGCGTGAAGCATCATTAGATGCAATCCGTGGGAGCGTCAACCATGGTT
GGAATGTTGTTTTGCCACAAAGTGATAATAATTTCCATTCAATAAAGATAACCTTGGTAA
ATATTAATGCTGCTTTCAAGAAAGTCAAACCATCAGTTAGTGAACAGGATCGTTTATTAT
ACGAAGAAATGAAACGAAAGTTTACAAAATAAAAACAA
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[154-417] 9.21E-60 - T[423-705] 2.29E-63 |
| SMART |
AAA+_ATPase (IPR003593) - T[189-326] 3.4E-23 - T[461-597] 3.4E-22 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[193-322] 6.5E-42 - T[465-594] 1.4E-47 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[294-312] . - T[565-583] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPAT5_HUMAN | 36.422 % | 397 | 1.97E-126 |
| TERA_HUMAN | 46.414 % | 464 | 3.47E-153 |
| NVL_HUMAN | 56.393 % | 708 | 0 |