- Clone 'ciad029k20' >
- Transcript 'KH2012:KH.C3.394.v1....' >
- Transcript 'KH2012:KH.L116.7.v2....'
Transcript Model
Transcript Id
KH2012:KH.L116.7.v2.A.SL3-1
Possible name(s)
MUC6
Gene model
Location
KhL116 [1,949 / 11,157]
Amino acid sequence
Length: 856
>KH.L116.7.v2.A.SL3-1
EIPTQQSCYLESFRRVFSHTIWYPHCYGAYYNVQQCDLLGRCWCVRMQSGRSISDVYHAH
GTVDCFRTQSTCRGKMMFYQCPTCNVTCADVGNPPSCSPTSCIPRCQCPPGFYLKNDQCV
TADQCRPACPGNQLYSTCAGCEQTCHQRNVNTPCTLQCRQGCACPSGTYLHGDQCLTDAQ
CSVALACPHNQIYSLCAGCSQTCAGRNTPTICTLQCRQQCTCPTGTYLHNGQCLTNAQCD
AALACPSNQVYSLCAGCDMTCSQRGQLIGCATICRQKSCSTIKTCRQRCACPINHVRDAN
NVCVNADACTTGDQGAQTACQQQQTSPQPLECDTEGNFVTQQCNNGVCFCVDSQTGSELT
GTRKPTSMFDLDCQFLSGKLSIIRRRGKVVSAPSFNPEVMSSRLLAATIVVYVSLGETPN
GTCPADSAFASCATECPPTCSNPNPRCTRRCAVDCVCNSGMIKASATNRTCVPMSDCPAT
PSCRIARAMLPGNPVFPQCNADGTYVPTQCDANDNCYCVYENGTRITGSEGVSSLLSALN
HRACIEARTCAATPGMTFLPCAPPCDATCGEPRRLCSLLESCTARCGCMAGYLLAPDNRT
CVPANTCPSSQPVCNFELGEIFSTCAPSCDATCFDLRRPCSLTKICRQRCTCPEGHVRDA
LNACVPVSSCAPPLPPSCDNALDEVWSDCATECDATCALPRKPCSLIRSCTERCACPNGK
IRNSENRCVTSEQCTQRALNSRTACQQQYDEMSSPLIMDAFIPDCDNVTGLYMLKQCYGF
GQSSCWCVNPETGVELPNTRVPGYRDLLDLNCSTALTEARRLAIAPLEAQSPPPPPADPV
TPTAPETTIPPHPPLP
Nucleotide sequence
Length: 3,121
>KH2012:KH.L116.7.v2.A.SL3-1
GTGAAATTCCTACGCAGCAAAGCTGTTATCTCGAATCATTTCGACGTGTCTTCTCGCACA
CCATTTGGTACCCGCATTGTTATGGAGCTTACTACAACGTCCAGCAATGTGATCTTCTTG
GAAGATGTTGGTGTGTTCGGATGCAAAGTGGAAGATCCATATCGGATGTTTATCACGCTC
ATGGAACCGTCGACTGCTTCAGAACACAATCTACATGCCGAGGTAAAATGATGTTCTACC
AATGCCCAACCTGCAATGTAACATGTGCTGATGTTGGTAACCCTCCGTCTTGCTCGCCCA
CTTCGTGCATCCCACGATGTCAGTGTCCACCAGGCTTCTATCTCAAGAATGATCAGTGTG
TGACTGCTGATCAGTGCAGACCAGCATGTCCTGGCAACCAACTGTACAGCACGTGTGCCG
GTTGTGAACAAACATGTCATCAACGCAACGTCAATACCCCATGCACGCTGCAATGTCGGC
AGGGGTGTGCTTGCCCAAGCGGAACTTATCTCCATGGTGACCAATGTTTGACAGACGCTC
AATGCTCGGTGGCTCTCGCGTGCCCACATAATCAAATATATTCACTTTGCGCTGGATGCA
GCCAAACGTGTGCGGGGCGTAATACACCAACTATATGCACACTACAATGCAGACAACAGT
GCACTTGCCCAACTGGAACTTATCTACACAATGGACAATGCTTAACAAATGCACAATGTG
ACGCTGCTTTGGCGTGTCCCAGTAACCAGGTATACTCCTTATGTGCTGGGTGTGATATGA
CTTGTAGCCAACGAGGTCAGCTCATAGGGTGTGCTACCATATGTAGACAGAAGTCATGCT
CGACAATCAAAACATGTCGTCAGAGATGTGCGTGCCCGATTAATCATGTCCGTGACGCAA
ATAACGTCTGTGTAAACGCTGATGCGTGCACAACAGGCGACCAGGGAGCTCAAACTGCTT
GTCAGCAGCAACAAACAAGTCCGCAGCCACTGGAGTGCGATACAGAGGGCAACTTTGTGA
CACAACAATGCAACAATGGTGTTTGCTTCTGCGTTGATTCTCAAACCGGCAGCGAACTTA
CTGGAACCCGAAAACCAACCTCCATGTTTGACCTTGACTGCCAGTTCCTTAGTGGTAAGT
TGTCGATAATCCGGCGCCGTGGCAAAGTGGTTAGCGCGCCTTCCTTTAACCCAGAGGTAA
TGAGTTCAAGGCTTCTTGCTGCTACCATTGTGGTGTATGTGTCCTTGGGTGAAACACCAA
ACGGCACCTGTCCCGCTGACTCTGCATTTGCCTCTTGTGCCACCGAGTGTCCACCCACAT
GTTCGAACCCCAACCCCCGATGTACGAGGCGTTGTGCGGTTGATTGTGTGTGCAACAGTG
GAATGATTAAAGCATCCGCCACCAACCGAACTTGCGTTCCAATGAGCGATTGTCCAGCTA
CACCAAGCTGTCGCATCGCTAGAGCAATGTTGCCAGGCAACCCCGTTTTCCCACAATGCA
ATGCGGACGGTACCTATGTCCCCACACAGTGCGATGCAAACGACAACTGTTATTGTGTTT
ACGAGAATGGTACGCGCATCACTGGTAGTGAAGGGGTGTCGTCTCTGCTCAGTGCATTGA
ACCATAGAGCATGCATTGAAGCACGAACTTGTGCAGCTACACCAGGCATGACCTTCCTCC
CTTGTGCGCCACCGTGTGATGCAACATGTGGCGAACCACGACGTTTATGCAGTTTGTTGG
AATCTTGTACTGCAAGGTGTGGATGTATGGCAGGGTATCTACTTGCACCAGATAATCGAA
CATGTGTACCAGCTAATACGTGCCCTTCAAGCCAACCAGTTTGCAACTTTGAGCTCGGCG
AAATATTCAGCACGTGTGCGCCCTCGTGTGATGCAACTTGCTTCGACCTTCGACGTCCGT
GCAGTTTGACGAAGATCTGTCGACAGAGATGCACGTGTCCGGAGGGTCATGTCCGGGATG
CACTGAACGCATGTGTTCCTGTCAGTTCGTGTGCTCCACCTCTTCCTCCTTCCTGTGACA
ATGCGCTCGATGAAGTGTGGTCAGATTGTGCAACGGAGTGCGACGCCACGTGTGCTTTGC
CACGAAAACCATGCAGTCTTATTCGCAGCTGTACTGAAAGGTGTGCATGCCCCAACGGAA
AAATACGGAACTCAGAAAATCGTTGCGTCACCTCAGAGCAGTGTACCCAAAGAGCTCTTA
ATTCTCGAACTGCTTGCCAGCAGCAATATGACGAAATGTCAAGCCCATTGATAATGGATG
CTTTTATTCCGGATTGTGACAACGTTACTGGGTTGTACATGTTGAAACAGTGCTATGGGT
TTGGGCAAAGTTCTTGTTGGTGCGTTAACCCCGAAACTGGGGTTGAACTCCCAAATACAA
GGGTGCCAGGGTACAGAGACCTTCTGGACCTTAATTGCTCAACTGCACTTACTGAGGCTC
GACGATTGGCCATTGCCCCACTTGAAGCTCAGTCACCCCCACCCCCTCCTGCAGATCCAG
TAACCCCAACAGCCCCCGAAACTACTATCCCCCCACACCCCCCATTACCCTAAGAAAATA
TCATAGTGACAATTACTCACAGCATGTAACAAACTACTTCATACATACCTTTAGTATTAA
CACATCAAATGTTTACTCTGGGCAACTATTAATAAATGCAGAAAAATTTGCAAGTCCGAC
ATACGAATGTGCCCAGCAGTTTTCTAATTTCTCATACACTTACATTTCACTTATTCATTT
TCACTTCGAAAATTAGTTTCGTACTCAAAATCATTTTTACCCAACTTACCCATTTTCCCA
TACAAACTGACATTTTACAATTAAACAGTGTTTCCATATACCTTCCTGCAGAATGTGGAT
AAAATATGATACTGCAACACTAAAAATTGACATAAAGCTTGCTACAGTCAAAGTGGCGTA
TTGGCTCTTATGTAAAATTAGATGAACATAACTAACTACTGAGCTACAACTTTTACTTCA
TTCTATTTTATCTTGTATTTATATTTATTATACGGGAATTTTAAACCAGTACAGATATGT
TTTTCTATTGCATGTTTTCGTTCTTGTGTCGTTTTGCATTGTTAAATAAAACATGAACAC
A
| ProSiteProfiles |
Thyroglobulin_1 (IPR000716) - T[5-65] 6.695 - T[317-373] 8.84 - T[480-544] 8.576 - T[742-812] 10.694 |
| SUPERFAMILY |
Thyroglobulin_1_sf (IPR036857) - T[5-65] 4.45E-6 - T[331-374] 7.98E-10 - T[482-532] 2.22E-11 - T[737-814] 4.45E-14 |
| SMART |
Thyroglobulin_1 (IPR000716) - T[23-69] 0.33 - T[329-377] 7.5E-7 - T[496-534] 7.8E-4 - T[762-816] 2.7E-9 |
| SUPERFAMILY |
Ser_inhib-like_sf (IPR036084) - T[70-125] 2.49E-8 - T[125-182] 1.02E-8 - T[184-240] 3.27E-9 - T[243-309] 6.28E-5 - T[422-478] 1.24E-8 - T[554-607] 1.8E-5 - T[619-670] 4.45E-8 - T[683-734] 1.26E-7 |
| Pfam |
TIL_dom (IPR002919) - T[72-125] 4.8E-6 - T[129-181] 3.4E-7 - T[187-239] 4.7E-7 - T[423-477] 2.4E-8 - T[554-607] 1.3E-6 - T[619-670] 9.5E-9 - T[683-734] 7.3E-8 |
| SMART |
EGF-like_dom (IPR000742) - T[87-120] 29.0 - T[435-472] 49.0 - T[560-602] 16.0 - T[624-665] 240.0 - T[688-729] 180.0 |
| Gene3D |
Thyroglobulin_1_sf (IPR036857) - T[306-376] 2.4E-8 - T[480-534] 1.4E-9 - T[742-813] 1.1E-11 |
| Pfam |
Thyroglobulin_1 (IPR000716) - T[328-367] 9.0E-7 - T[496-531] 1.7E-9 - T[751-801] 4.9E-11 |
| CDD |
Thyroglobulin_1 (IPR000716) - T[745-805] 4.55641E-7 |
| ProSitePatterns |
Thyroglobulin_1 (IPR000716) - T[761-793] . |
| Protein Name | Identity | Bit Score | e-value |
|---|