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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C7.190.v2....' > 
  2. Transcript 'KH2012:KH.L116.80.v1...'

Transcript Model

Transcript Id

KH2012:KH.L116.80.v1.A.ND1-1

Possible name(s)

FTSJ1; FTSJ3; MRM2

Gene model

KH2012:KH.L116.80

Location

KhL116 [196,563 / 200,666]

Sequences

Amino acid sequence

Length: 259

>KH.L116.80.v1.A.ND1-1
PRYQRAFVDCIMLSHKEFNTVHLGQAVEIKKRKIRVGSKNFMEIPIKGTIEYVSRQLSDP
FVKMRHLEGYRCRSAYKLMDIVEKHDLLKPGMKVVDLGAAPGSWSQVAAERVINKDDDGL
VIAVDLLKFPPLDGVTQITGDFTKKETQDEIKALLGTEENRFVDIVLCDAAPSASGFKNK
DHLAIVQIIAAATNFTLKMLANHGNFLFKILDGTETMKIKKFLSLHFMSVASLKPKASRS
ESAEHFILCKNYNRQENIS

Nucleotide sequence

Length: 1,356

>KH2012:KH.L116.80.v1.A.ND1-1
GCCGGGCGTGTTTTAGTAGGACCCGTAAAATCTCAATTTAAAAACTTTCACTCTTCTCGC
TGCGGGGGATTTTTTAGACATCAATATATGTATTTTTCCGATTTAAAGAAGATTAGTAAA
ATGACCACGTTACCAAAGAGCATTTGTAGATTGTATAATGTTGTCACACAAAGAATTCAA
CACAGTCCATCTTGGTCAAGCTGTTGAAATAAAGAAACGAAAAATTCGAGTTGGTTCAAA
AAACTTTATGGAAATTCCAATAAAAGGAACCATAGAATATGTTTCTCGTCAACTCTCCGA
TCCATTTGTTAAGATGAGGCATTTGGAAGGTTACAGGTGTCGAAGCGCTTACAAGTTGAT
GGATATTGTTGAAAAACATGATTTGTTGAAACCTGGAATGAAAGTTGTTGATCTTGGAGC
AGCACCAGGATCTTGGTCACAAGTAGCAGCAGAGAGGGTTATAAACAAAGATGATGATGG
TTTGGTAATCGCCGTTGATTTACTTAAATTCCCCCCACTTGATGGCGTAACACAAATCAC
AGGAGATTTCACCAAAAAGGAAACACAGGATGAAATTAAAGCTTTGCTTGGAACGGAAGA
AAACAGATTTGTGGACATTGTACTTTGTGATGCTGCTCCAAGTGCTTCTGGATTTAAAAA
TAAAGATCATTTAGCGATAGTTCAAATTATAGCAGCTGCAACTAACTTTACATTAAAGAT
GCTTGCCAATCATGGGAATTTTCTTTTCAAGATTCTAGACGGAACTGAAACAATGAAAAT
TAAAAAGTTTCTGTCATTACATTTTATGAGTGTTGCATCTTTGAAACCAAAAGCAAGTCG
CTCAGAATCTGCTGAACATTTTATCCTTTGTAAAAATTACAATAGGCAGGAAAATATATC
GTAAAATTTTTATTTTTTTTGAAACACCTATTTATTGCAACAATTTTGAATTCCAACATT
AAAATGTCATAATAAAGCAATTAAATTATTGTTCTGTAAAGTTTGCACTGAGTGGTATGC
CTAAACTAATGTTTCTTAACCCTGTATTACAACCTTAAAGTGGGTTACCACTTGACTTGG
TCAGGTTGGCTAATATGATGGTTCACCAACTGCAAAAATCCCATTTAAGTAAAGTTCTAT
GTAGGCCTAAAGGAACTTGTAAAATTCAGTTTGGAAATTGGATCACAAAGTTTTGGCATT
AAATTATGTCTAAATACTGGTTTCCCTCTACAAAGGCTCAAAAGCAATAGTTTCAAAAAT
AGTGATAAAATGAAACTTATTAAACGGTAAATGTTTTAAATAATACATAATACTACTTTT
AAAATAATTGCACTTACAAAATAAAATCGAAGATAA

InterProScan

PIRSF
rRNA-MeTfrase_E (IPR015507) - T[42-259] 3.9E-63
Hamap
rRNA-MeTfrase_E (IPR015507) - T[54-253] 28.346
SUPERFAMILY
SAM-dependent_MTases (IPR029063) - T[69-252] 8.91E-32
Pfam
rRNA_MeTrfase_FtsJ_dom (IPR002877) - T[70-252] 3.0E-55

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRM7_HUMAN 35.749 % 127 8.86E-35
SPB1_HUMAN 30.5 % 98.6 2.65E-23
MRM2_HUMAN 35.2 % 160 9.1E-49