- Transcript 'KH2012:KH.L116.85.v2...' >
- Region 'REG00001391' >
- Transcript 'KH2012:KH.L116.85.v1...'
Transcript Model
Transcript Id
KH2012:KH.L116.85.v1.A.nonSL5-1
Possible name(s)
TUBB; TUBB2B; TUBB4B
Gene model
Location
KhL116 [160,222 / 163,429]
Amino acid sequence
Length: 450
>KH.L116.85.v1.A.nonSL5-1
FLFIMREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATG
GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
LDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVS
DTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGV
TTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDA
KNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDI
PPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN
DLVSEYQQYQDATAEEEGEFDEEEEEGEEA
Nucleotide sequence
Length: 1,743
>KH2012:KH.L116.85.v1.A.nonSL5-1
ATGACGTCATGAATATCGAGCGCCGAGGCGCGCTTAAATATCGCGACGTGTGGTGCTGTC
GTCATTCTGCGATTGAGTCGAGTACAGAGAATATTTTTATATATTTTTAACAATCTTTAG
TTTCTATTCATCATGCGAGAAATTGTTCATCTGCAAGCTGGCCAATGCGGCAACCAAATC
GGAGCTAAGTTCTGGGAAGTCATCTCTGATGAACACGGTATCGACCCAACTGGTACCTAC
CACGGAGACAGTGACCTCCAACTCGAACGTATCAACGTGTACTACAATGAAGCAACCGGT
GGCAAATATGTCCCACGTGCCGTACTTGTTGATCTCGAGCCAGGAACCATGGACTCCGTG
AGATCTGGCCCATTCGGCCAAATTTTCAGACCAGACAACTTCGTTTTCGGACAAAGCGGA
GCTGGCAACAACTGGGCCAAAGGTCACTACACAGAGGGCGCTGAGCTCGTCGACTCCGTT
TTGGACGTTGTCCGAAAGGAAGCCGAAAGCTGCGATTGCCTTCAAGGTTTCCAGCTCACA
CACTCGCTAGGTGGCGGTACCGGCTCCGGTATGGGTACCCTTCTCATCAGCAAAATCCGT
GAGGAATACCCCGACAGAATCATGAACACTTTCAGTGTTGTCCCATCACCAAAGGTGTCC
GACACCGTTGTCGAACCCTACAACGCAACCCTCTCAGTCCATCAACTTGTTGAGAACACT
GACGAGACCTACTGCATCGATAACGAGGCCCTTTACGATATTTGCTTCCGAACCCTTAAG
CTTACCACCCCAACCTATGGTGACTTGAACCATCTCGTCTCCGCAACCATGAGCGGTGTC
ACCACCTGCTTGCGATTCCCCGGTCAATTGAACGCCGATCTCCGTAAATTGGCTGTCAAC
ATGGTTCCATTCCCACGTCTTCACTTCTTCATGCCCGGGTTCGCCCCACTCACCAGCAGA
GGCAGCCAACAATACCGTGCCCTTACTGTACCAGAGCTCACCCAGCAAATGTTCGACGCC
AAGAACATGATGGCTGCATGTGATCCACGTCACGGCCGATACCTCACCGTTGCCGCCATG
TTCCGTGGCCGCATGTCCATGAAGGAAGTTGATGAGCAGATGCTCAACGTACAAAACAAG
AACAGCTCCTACTTCGTTGAATGGATTCCCAACAACGTGAAGACAGCCGTCTGTGACATC
CCACCAAGAGGTCTTAAGATGTCTGCCACATTCATTGGAAACAGCACCGCTATCCAGGAA
CTCTTCAAACGTATCTCCGAGCAGTTCACCGCTATGTTCAGACGTAAGGCTTTCCTCCAT
TGGTACACTGGTGAAGGTATGGACGAGATGGAATTCACTGAAGCCGAGAGCAACATGAAC
GACTTGGTGAGCGAATACCAGCAATACCAAGACGCCACCGCCGAGGAAGAAGGCGAATTC
GATGAGGAGGAAGAAGAGGGCGAGGAAGCTTAAATCCCATACGACCTGTGCCACACCATC
GCACCCCCGACTCTATCAAAGGATCTTTAATAACATTCCTTATTTCTTACCATTTCGCTA
TACACCGGTTAAGGCTTAATTTCGTTCTCTATATTCTTTCTCACCTTTGACGTTGTTTTT
CTACAATGAAATTGGATTGTTCTTCGGTTACTTTCAAACCTACACTACGTTTCGAGCCTT
CTCCGACTAATATAATTCCTTTCGCGGGAAAGTAAATAAACCAAGGAATATGCACACAGG
AAA
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[5-247] 1.19E-102 |
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[5-267] 1.4E-128 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[7-215] 1.1E-68 |
| PRINTS |
Tubulin (IPR000217) - T[14-34] 2.2E-105 - T[55-74] 2.2E-105 - T[97-108] 2.2E-105 - T[110-134] 2.2E-105 - T[136-154] 2.2E-105 - T[155-176] 2.2E-105 - T[180-193] 2.2E-105 - T[194-214] 2.2E-105 - T[374-402] 2.2E-105 |
| PANTHER |
Beta_tubulin (IPR002453) - T[15-446] 0.0 |
| PANTHER |
Tubulin (IPR000217) - T[15-446] 0.0 |
| PRINTS |
Beta_tubulin (IPR002453) - T[45-62] 5.3E-124 - T[92-103] 5.3E-124 - T[112-130] 5.3E-124 - T[156-168] 5.3E-124 - T[216-228] 5.3E-124 - T[234-243] 5.3E-124 - T[249-262] 5.3E-124 - T[269-285] 5.3E-124 - T[315-333] 5.3E-124 - T[333-347] 5.3E-124 - T[351-374] 5.3E-124 - T[381-392] 5.3E-124 - T[416-434] 5.3E-124 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[51-248] 2.1E-69 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[144-150] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[248-433] 8.85E-85 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[250-387] 7.2E-51 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[265-385] 6.0E-43 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[268-377] 4.6E-58 |
| Gene3D |
Tubulin_C (IPR023123) - T[378-449] 3.2E-36 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBB4B_HUMAN | 99.321 % | 926 | 0 |
| TBB2B_HUMAN | 97.072 % | 915 | 0 |
| TBB5_HUMAN | 97.285 % | 911 | 0 |