- Region 'REG00001482' >
- Clone 'cien53686' >
- Transcript 'KH2012:KH.L116.90.v1...'
Transcript Model
Transcript Id
KH2012:KH.L116.90.v1.A.ND1-1
Possible name(s)
TUBB; TUBB2B; TUBB4B
Gene model
Location
KhL116 [164,176 / 167,541]
Amino acid sequence
Length: 357
>KH.L116.90.v1.A.ND1-1
MREIVHLQFGQCGSKIGTEFWEGICKEHGIGTTGHYEGDNDHQLERINTYFDNVQGSKYV
PRAVLVDMDADEMNFLKSNPIGQVMRAENLVFCGQKTGNNWAKGFYTDGAVTMEAVLKAV
RKEVESCDFAQGFQIMHSLGGGTGSGMGCLMLQKLKDEYPGKIFTTYTVFPSQTSSYSVN
EPYNVLLSMPHLIENSTETFCIDNEALFNTCMRLTGNSTIPAMNKLVGPVICGITAPFRF
PGRLNANLRKLAVNLVPLPRLHFLTPGYAPFFEGETHSNLTVAQLTQQVLDDKNMLVLCA
PSTGKYLGLSAVYRGKLSQKEVNEQMYNMQITNSTQFLKWIPDNLKSSVNTFPPKWC
Nucleotide sequence
Length: 1,681
>KH2012:KH.L116.90.v1.A.ND1-1
ATGCGAGAAATAGTTCACTTACAATTTGGTCAGTGTGGCAGCAAGATTGGAACTGAGTTC
TGGGAAGGAATATGTAAAGAACATGGCATCGGTACAACGGGTCACTACGAAGGAGACAAC
GACCATCAACTTGAACGTATTAATACGTACTTTGACAATGTGCAGGGGTCAAAATATGTC
CCACGTGCCGTACTCGTTGATATGGATGCTGATGAAATGAACTTCTTAAAGTCAAATCCA
ATTGGCCAAGTTATGAGAGCAGAAAATCTAGTTTTCTGTGGTCAAAAAACTGGTAACAAT
TGGGCAAAAGGTTTCTATACCGACGGCGCAGTAACTATGGAGGCAGTTTTAAAAGCTGTT
CGTAAAGAGGTCGAAAGTTGTGATTTTGCTCAAGGTTTTCAGATTATGCATTCGCTAGGT
GGCGGTACAGGGTCGGGCATGGGATGTCTTATGTTGCAGAAATTAAAGGACGAATACCCA
GGAAAAATTTTCACTACATACACTGTTTTTCCTTCACAAACGTCTTCTTATTCTGTCAAC
GAGCCTTACAACGTTCTTCTTTCTATGCCGCACTTGATTGAAAACAGTACCGAGACATTC
TGTATTGATAACGAAGCCCTTTTCAATACCTGCATGCGTTTAACTGGAAACTCAACCATT
CCTGCCATGAACAAATTAGTAGGACCCGTCATCTGCGGAATTACGGCCCCATTTAGATTC
CCAGGTCGTTTGAACGCCAACCTTCGAAAGTTAGCAGTCAACCTGGTTCCCCTACCCCGC
CTGCATTTCCTTACACCAGGATATGCTCCGTTTTTCGAAGGTGAAACACATTCCAACCTC
ACAGTAGCACAGCTAACACAACAAGTTCTTGACGATAAAAATATGTTGGTATTATGTGCA
CCAAGTACTGGAAAATATTTAGGTCTCTCCGCTGTATATCGAGGCAAGCTATCGCAGAAA
GAAGTTAACGAACAGATGTACAACATGCAAATTACTAACAGTACACAGTTTCTAAAATGG
ATTCCTGACAATTTAAAGTCGTCTGTCAATACATTCCCGCCAAAATGGTGTTAACGCCTC
CGCAACAATCATAGCGAACACTACATCCGTCAAGGTAACTTACTTTAGTTGCATATATAC
GCATGTCTTCATATGGACCTATAGGCCTGCTAATATTTAATTAGCAAAAAGTCACAATAC
CTCCGAGGTGTTGGTTATAGACTTTGGACAATGTTTTTTTTTTTATTTAGGGTGCCTTTT
TTGGTTACAGGAGCTGTTCATTCGAATATATCAACAAGTTAAGAAAATGATCAAGTACGG
TACTTTTCTTCACTTCTACACACAGGAGGGAATGGACAAAAAAGAATTTGAAGATGCCCT
AAATAGCGTGTCAGATTTAATCAATGAATACCAACAATGTTAGAACACCACAGTTAAGCC
TATGTATAATACATGACGTTTAACAGCGCTACCGTATAGCGCCCAATATATATATATAGC
AACACAAATTAATGAGCTTCATAACTTTTGTACATCCAAGTCGTCTAATGCCATTCGTTA
TCTATGCTTCTAGTTATACCGTTGCTCATTTACATTTAAATCAAATCCACATAATAACAA
GACGGTAGCGCAATATTTTACCTGTTACAATCAAGAAATACACGTGTATGACGCCTCCTA
A
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-261] 2.0E-95 |
| ProSitePatterns |
Beta-tubulin_BS (IPR013838) - T[1-4] . |
| PANTHER |
Tubulin (IPR000217) - T[1-355] 7.7E-139 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-241] 6.8E-75 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[3-211] 1.4E-61 |
| PRINTS |
Tubulin (IPR000217) - T[10-30] 3.3E-58 - T[51-70] 3.3E-58 - T[93-104] 3.3E-58 - T[106-130] 3.3E-58 - T[132-150] 3.3E-58 - T[151-172] 3.3E-58 - T[176-189] 3.3E-58 - T[190-210] 3.3E-58 |
| PRINTS |
Beta_tubulin (IPR002453) - T[41-58] 2.9E-35 - T[88-99] 2.9E-35 - T[108-126] 2.9E-35 - T[152-164] 2.9E-35 - T[243-256] 2.9E-35 - T[263-279] 2.9E-35 - T[307-325] 2.9E-35 - T[325-339] 2.9E-35 - T[343-357] 2.9E-35 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[47-242] 7.5E-31 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[140-146] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[242-355] 2.29E-33 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[244-355] 9.2E-4 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[259-355] 3.7E-24 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[262-357] 1.9E-30 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBB4B_HUMAN | 54.722 % | 388 | 1.61E-133 |
| TBB2B_HUMAN | 53.889 % | 388 | 1.77E-133 |
| TBB5_HUMAN | 53.889 % | 385 | 1.89E-132 |