Aniseed - Transcript Card

Transcript 'KH2012:KH.L116.99.v1...'

Transcript Model

Transcript Id

KH2012:KH.L116.99.v1.A.nonSL3-1

Possible name(s)

THAP10; THAP2; THAP3

Gene model

KH2012:KH.L116.99

Location

KhL116 [22,683 / 24,501]

Sequences

Amino acid sequence

Length: 213

>KH.L116.99.v1.A.nonSL3-1
MPNRCVVGGCLNTYQNKVKIHKFPKSPILKQCWVKFVQCTRADFEQPSKNSVICGKHFKP
DCYWKKFGSSTELLLESAIPTEKSKKAAPATQKRKWTVAFTKQSRKKTKLLDEVLGCSPT
SNAAIDESPNENVSEETLSVPEKDDKCIQTETAQHNQKTQTSLRRGKHRKCKKTFIDTPI
LSCLPPLTSNYLQPDKDVSNAAHALLQIKFFTK

Nucleotide sequence

Length: 1,693

>KH2012:KH.L116.99.v1.A.nonSL3-1
ATCGAGGGTCAAAAGTGAGTGAGAAAGACTGTGTTCAGTTTATACTTTAGAGAATCGATA
AAGTCCTGTTTATCGCGAGAAACGCCTTATTTCGTAGATGCCGAACCGGTGTGTTGTTGG
AGGGTGTTTAAATACCTACCAAAATAAAGTAAAAATACATAAATTTCCGAAAAGCCCAAT
ATTAAAGCAGTGCTGGGTGAAGTTTGTGCAATGTACAAGGGCAGATTTTGAGCAACCTTC
CAAGAACAGTGTTATATGCGGTAAACATTTTAAACCCGACTGTTATTGGAAAAAGTTTGG
ATCCTCTACTGAGTTATTGTTGGAGTCTGCTATACCTACAGAAAAGTCAAAAAAAGCTGC
ACCTGCTACACAAAAAAGAAAATGGACTGTTGCATTTACCAAACAATCAAGAAAAAAAAC
TAAGTTGTTGGATGAAGTATTGGGCTGCAGTCCAACATCTAATGCAGCTATAGACGAATC
ACCAAATGAAAATGTTTCAGAGGAAACACTAAGTGTGCCAGAGAAAGATGACAAGTGTAT
TCAAACTGAAACTGCACAACACAACCAGAAAACACAAACGAGCCTACGAAGAGGAAAACA
TAGAAAATGTAAAAAGACATTCATAGACACACCAATACTTTCTTGTCTACCACCGTTAAC
CTCCAACTATCTTCAACCTGACAAGGACGTTTCAAATGCAGCCCATGCTTTGTTGCAAAT
AAAGTTTTTTACAAAATAGAAAATTTAATTTAAAATTGGATGCCCAGAAAACAATAGTCG
TTATAACATGGTTGTTCATCCACCTTGCCCACAATTGTAACAGCGTCGAGCCTTGAACCC
ATTACCTCTGGCTTACAGGCAGGTGTGCTAACTGCTAATCACTTTGCCAAGACGGCAGAC
TTGAATCCAGTACAGGTGTCACTTGGAAATGTAGATGTTAACAACACATGATGGGATAAG
CACAAGAACACGTCGTCCAACATCTGTAGGCCACATGTCTGAATCTTCTAAACCTAAACA
ATAATAAACCGGACATAAAAACGCATACATCTATATCTATAATAAATTTTTGGAGATTGG
GCAGCTTAACCCATACAAATTGAACAACATACTAACTTGTGTTGCCTTGAAATAGAGTGC
ACAACTCTGCCATAATCTTGTTTGTAAGCTCAGTGTGCTGTCTCTAAAACCAAGGGATTG
CGACACGCGCCTTAAAATTGTTTTTTTTCCCTTAATTTATTTTTAAGTTGACAGCAACAT
AACGAATGTAAAAGAGAGGGCATTGATATATAATTGCCACATGTGCAACTTAACGAAAAT
TATTATATGTATCATCTTCTGATATATATAAAAAAAACAATTGCAGCTCGCCATTCGTAT
TGGCAATATTGGCAATTTGCAAGGTGTTTGGGCTTCAGGGCCTGCACCCCATTTTCCTAA
TACTCAAGGGAGGTTTAAGCCGATCCAACATGTATCCATAATCACCATGTATATCCTCAA
CATCTTCATCTAAGTCAGAAATTGATTCTGCACCATCAGAACTTTCTAAATTAGCCATGT
TCACTCTTCAACTCTGGTTCAGCAAGCTGTACTAGCACTAACTGCGCTTTGTTCGTTTCC
CACTCTCTTTGACCCTCGATGACGTCACGCACGGTTTGTCGCGTTCGCTCAATTTCGTTC
ACATTCAAACCAA

InterProScan

ProSiteProfiles	THAP_Znf (IPR006612) - T[1-83] 18.458
Gene3D	THAP_Znf_sf (IPR038441) - T[2-67] 6.2E-9
SMART	THAP_Znf (IPR006612) - T[3-89] 8.4E-12 - T[20-88] 2.2E-4
Pfam	THAP_Znf (IPR006612) - T[5-81] 1.1E-11

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value