- Transcript 'Harore.CG.MTP2014.S5...' >
- Clone 'cien203441' >
- Transcript 'KH2012:KH.S546.2.v1....' >
- Clone 'cign029j04' >
- Transcript 'KH2012:KH.L11.7.v1.C...'
Transcript Model
Transcript Id
KH2012:KH.L11.7.v1.C.ND1-1
Possible name(s)
RASSF1; RASSF3; RASSF5
Gene model
Location
KhL11 [39,946 / 42,596]
Amino acid sequence
Length: 355
>KH.L11.7.v1.C.ND1-1
RQRSVSTPPTPPQQGVSYKSSEDNVVLPNLSSDVETKSHRSMSESQKEPLVQGESPKLGH
NFEAYELKEWVNWCDACGSVILSLFRKCVSCSKCKMVCHEKCATTVSLTCEADQHVRSLT
LNDPNALNRYKTIVQETKDETTLKEFNTIHRVLSTEEIQERIENFNQTVKGSQQMTLQDN
GETFRGFIRVSMNLMRPVSVHDSTKTSRKPTRKASFYIDKGALKALHLTSDTTSELVVQA
LLNKYSISDNPMKFALFEKQVREEGHVILRKMLPRERPLFLRLLWGNGNSDKRGFILQEN
ESRDIHWESFSVAELLMFIKILDKEENDYIAEIKRKYKNKETDIRNAISHQSKRS
Nucleotide sequence
Length: 1,133
>KH2012:KH.L11.7.v1.C.ND1-1
CGTCAGCGATCGGTTTCCACCCCACCCACACCCCCACAACAAGGGGTCTCCTACAAAAGT
TCGGAAGATAACGTTGTTTTACCGAATCTATCATCAGATGTTGAAACAAAATCTCACCGA
TCGATGTCCGAATCACAAAAAGAGCCCCTGGTACAAGGTGAATCGCCTAAACTAGGACAC
AACTTTGAGGCTTATGAGCTGAAGGAATGGGTGAACTGGTGCGACGCGTGTGGGAGCGTC
ATCTTGTCCTTGTTTAGGAAGTGTGTGTCTTGCTCAAAATGCAAGATGGTCTGCCACGAA
AAATGCGCGACCACCGTTTCCCTCACGTGCGAGGCCGACCAACATGTCCGTAGTTTGACC
TTGAATGACCCCAACGCACTTAATCGATACAAAACCATTGTTCAAGAGACAAAGGATGAG
ACGACACTGAAAGAGTTCAACACCATTCACCGAGTTCTATCGACCGAGGAAATCCAGGAA
AGAATCGAAAACTTCAACCAAACAGTGAAGGGGAGTCAACAAATGACATTGCAAGATAAC
GGAGAAACATTCCGTGGTTTCATCCGTGTTTCAATGAACCTCATGCGCCCCGTCAGTGTG
CACGATTCAACCAAGACCTCTCGTAAACCGACCAGGAAAGCTTCGTTTTATATCGATAAG
GGTGCTTTGAAAGCATTACATCTAACATCGGACACCACATCGGAGTTGGTCGTACAAGCA
CTGCTTAACAAGTACAGCATCAGCGATAACCCGATGAAGTTCGCTTTGTTCGAGAAACAA
GTTCGTGAGGAGGGGCATGTGATCCTACGCAAGATGTTGCCGCGTGAACGCCCGTTGTTC
CTCAGGTTATTATGGGGGAATGGTAACAGTGATAAAAGGGGTTTCATATTGCAGGAGAAC
GAATCAAGGGATATACACTGGGAATCCTTCTCAGTAGCCGAGCTACTTATGTTTATCAAG
ATATTGGACAAAGAGGAAAACGATTACATCGCCGAGATCAAACGCAAATATAAGAACAAG
GAAACCGACATTCGTAACGCCATCAGCCATCAAAGTAAAAGATCATGAATGTTATTTGTG
GTGCAATCATGTATTATTGTTGTCGTATATTAAACCAGCTTAATTTATTTAAA
| PANTHER |
C-RASSF (IPR033614) - T[51-350] 6.3E-82 |
| ProSiteProfiles |
PE/DAG-bd (IPR002219) - T[59-110] 12.055 |
| Pfam |
PE/DAG-bd (IPR002219) - T[60-112] 2.4E-7 |
| ProSitePatterns |
PE/DAG-bd (IPR002219) - T[60-110] . |
| SMART |
PE/DAG-bd (IPR002219) - T[60-110] 2.1E-7 |
| CDD |
PE/DAG-bd (IPR002219) - T[60-110] 2.22669E-9 |
| SMART |
RA_dom (IPR000159) - T[210-302] 7.8E-11 |
| ProSiteProfiles |
RA_dom (IPR000159) - T[210-302] 17.788 |
| Pfam |
RA_dom (IPR000159) - T[216-301] 1.4E-12 |
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[223-300] 2.2E-7 |
| ProSiteProfiles |
SARAH_dom (IPR011524) - T[304-351] 10.896 |
| Pfam |
SARAH_dom (IPR011524) - T[310-347] 4.9E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RASF5_HUMAN | 33.022 % | 185 | 6.14E-55 |
| RASF1_HUMAN | 36.334 % | 172 | 6.8E-51 |
| RASF3_HUMAN | 37 % | 118 | 2.4E-31 |