- Transcript 'KH2012:KH.C11.4.v2.A...' >
- Transcript 'KH2012:KH.L119.11.v1...'
Transcript Model
Transcript Id
KH2012:KH.L119.11.v1.A.nonSL2-1
Possible name(s)
TUBA1A; TUBA3C; TUBA3D
Gene model
Location
KhL119 [140,119 / 142,571]
Amino acid sequence
Length: 472
>KH.L119.11.v1.A.nonSL2-1
RFGPAFIPIVKALALIRISSNMRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSD
KTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDA
ANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSV
DYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI
ERPTYTNLNRIIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAE
KAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKR
TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEAEEGEDEY
Nucleotide sequence
Length: 1,557
>KH2012:KH.L119.11.v1.A.nonSL2-1
ATTACTTCAGTGGTGAACTCGCTTCGTAACGATAGCGCTTCGGCCCTGCATTTATACCTA
TAGTTAAAGCTTTAGCTTTGATACGGATCTCTTCAAATATGCGTGAATGTATCTCAATCC
ACGTTGGTCAAGCTGGTGTCCAAATCGGCAATGCTTGTTGGGAGTTGTATTGCTTAGAGC
ACGGCATCCAACCCGATGGTCAGATGCCAAGTGACAAGACAATTGGAGGGGGTGACGATT
CGTTCAACACTTTCTTCAGTGAGACAGGAGCAGGAAAACATGTTCCAAGAGCAGTTTTCG
TCGATCTGGAACCGACGGTTGTTGATGAGGTTCGTACTGGAACCTACAGGCAACTTTTCC
ATCCTGAACAACTGATTACAGGAAAGGAAGATGCCGCCAATAACTACGCAAGAGGCCACT
ACACCATTGGCAAAGAAATCGTCGATCTTGTTCTTGACCGAATTCGAAAACTAGCGGACC
AATGTACTGGTCTACAAGGTTTTCTTATTTTCCATTCATTCGGTGGAGGAACTGGTTCAG
GATTTGCTTCGTTGCTCATGGAAAGATTATCCGTTGACTACGGAAAGAAATCCAAACTTG
AGTTCGCAGTTTACCCGGCACCTCAGGTATCAACCGCAGTGGTGGAGCCTTACAACTCGA
TCCTGACCACTCACACCACTCTTGAGCATTCCGACTGCGCCTTTATGGTCGACAATGAAG
CTATTTATGATATTTGTCGCCGAAATCTCGATATTGAGCGTCCAACTTACACCAATTTAA
ATAGAATAATCGGTCAAATCGTGTCCTCCATCACCGCCTCCCTTCGATTCGATGGCGCGC
TTAACGTCGATTTGACCGAATTTCAAACCAACTTGGTGCCATATCCACGTATTCATTTCC
CATTGGTCACGTATGCTCCAGTTATCTCTGCTGAGAAAGCTTACCACGAGCAATTATCAG
TAGCTGAGATCACCAACGCGTGCTTTGAACCAGCCAATCAGATGGTGAAATGCGACCCAC
GTCATGGGAAGTACATGGCATGCTGCATGTTGTACCGCGGTGATGTTGTCCCGAAGGATG
TGAACGCTGCTATTGCTACAATTAAAACCAAACGAACCATCCAGTTCGTCGATTGGTGTC
CAACTGGCTTCAAAGTTGGTATCAACTACCAACCACCCACCGTTGTACCAGGTGGTGATT
TGGCAAAAGTTCAACGAGCGGTTTGCATGTTGAGCAACACAACAGCTATTGCCGAAGCTT
GGGCTCGTCTTGACCACAAGTTCGACTTGATGTACGCCAAGCGTGCATTCGTTCACTGGT
ATGTCGGTGAAGGAATGGAAGAAGGAGAATTCTCCGAAGCTCGCGAGGATCTCGCTGCTC
TCGAGAAAGATTATGAAGAAGTTGGAGTTGATTCAGTGGAGGGTGAAGCTGAAGAAGGAG
AAGATGAATATTAAATAAATTTTGATCACATTAACCCTGTCTATAACACCTTAAAACAAA
AAATTGCGTTTGGAATAAAACAAAACTAAAATTTAATTCCGATGCTTTTTGCAAGCA
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[22-265] 5.89E-102 |
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[22-289] 4.0E-133 |
| PANTHER |
Tubulin (IPR000217) - T[23-468] 0.0 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[24-234] 3.3E-68 |
| PRINTS |
Tubulin (IPR000217) - T[31-51] 7.2E-91 - T[74-93] 7.2E-91 - T[116-127] 7.2E-91 - T[129-153] 7.2E-91 - T[155-173] 7.2E-91 - T[174-195] 7.2E-91 - T[199-212] 7.2E-91 - T[213-233] 7.2E-91 - T[401-429] 7.2E-91 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[39-54] 8.4E-121 - T[66-79] 8.4E-121 - T[109-122] 8.4E-121 - T[141-149] 8.4E-121 - T[169-181] 8.4E-121 - T[182-193] 8.4E-121 - T[235-247] 8.4E-121 - T[295-310] 8.4E-121 - T[342-363] 8.4E-121 - T[368-381] 8.4E-121 - T[381-400] 8.4E-121 - T[406-422] 8.4E-121 - T[443-459] 8.4E-121 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[70-267] 2.6E-84 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[163-169] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[267-458] 2.53E-87 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[269-414] 1.2E-60 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[284-412] 1.6E-51 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[290-404] 7.5E-68 |
| Gene3D |
Tubulin_C (IPR023123) - T[405-471] 2.1E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA1A_HUMAN | 96.896 % | 926 | 0 |
| TBA3C_HUMAN | 98.664 % | 931 | 0 |
| TBA3D_HUMAN | 98.664 % | 931 | 0 |