- Transcript 'KH2012:KH.L119.32.v1...'
Transcript Model
Transcript Id
KH2012:KH.L119.32.v1.A.nonSL2-1
Possible name(s)
TUBA1A; TUBA3C; TUBA3D
Gene model
Location
KhL119 [134,395 / 137,060]
Amino acid sequence
Length: 461
>KH.L119.32.v1.A.nonSL2-1
FLLQVYQENNMRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFN
TFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTI
GKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFA
IYPSPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRL
IGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAE
ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTG
FKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG
EGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEAEEAEDEY
Nucleotide sequence
Length: 1,779
>KH2012:KH.L119.32.v1.A.nonSL2-1
CTTCTGGTGTAACTCACGTCGTAAGTTGTGAATTTTACCCTTGATTTTAAGCTGCTTTGC
TATTTATTTAGTTTCTCTTGCAAGTTTACCAAGAAAACAATATGCGTGAATGTATCTCAA
TCCATGTTGGTCAAGCTGGTGTCCAAATCGGCAATGCTTGTTGGGAGTTGTATTGCTTAG
AGCACGGCATCCAACCCGATGGTCAGATGCCAAGTGACAAGACAATTGGAGGGGGTGACG
ATTCGTTCAACACTTTCTTCAGTGAGACAGGAGCAGGAAAACATGTTCCAAGGGCAGTTT
TCGTCGATCTGGAACCGACGGTTGTTGATGAGGTTCGTACTGGAACCTACAGGCAACTTT
TCCATCCGGAACAACTGATTACAGGAAAGGAAGATGCCGCCAATAACTACGCAAGAGGCC
ACTACACCATTGGCAAAGAAATTGTGGATCTTGTTCTTGACCGAATTCGAAAACTAGCGG
ACCAATGTACTGGTCTACAAGGTTTTCTTATTTTCCATTCATTCGGTGGAGGAACTGGTT
CAGGATTTGCTTCGTTGCTCATGGAAAGATTATCCGTTGACTACGGAAAGAAATCCAAAC
TTGAGTTCGCCATCTACCCTTCCCCACAGGTATCAACTGCAGTGGTGGAGCCTTACAACT
CGATCCTGACCACTCACACCACTCTTGAGCATTCCGACTGCGCCTTTATGGTCGACAATG
AAGCTATTTATGATATTTGTCGCCGAAATCTCGATATTGAGCGTCCAACTTACACCAACT
TGAATCGTCTTATCGGTCAAATCGTATCCTCCATTACCGCCTCCCTCCGATTCGATGGCG
CGCTTAACGTCGATTTGACCGAATTTCAAACCAACTTGGTGCCATATCCACGTATTCATT
TCCCATTGGTCACGTATGCTCCAGTTATCTCTGCTGAGAAAGCTTACCACGAGCAATTAT
CAGTAGCTGAGATCACCAACGCGTGCTTTGAACCAGCCAATCAGATGGTGAAATGCGACC
CACGTCATGGGAAGTACATGGCATGCTGCATGTTGTACCGCGGTGATGTTGTCCCGAAGG
ATGTGAACGCTGCTATTGCTACAATTAAAACCAAACGAACCATCCAGTTCGTCGATTGGT
GTCCAACTGGCTTCAAAGTTGGTATCAACTACCAACCACCCACCGTTGTACCAGGTGGTG
ATTTGGCAAAAGTTCAACGAGCGGTTTGCATGTTGAGCAACACAACAGCTATTGCCGAAG
CTTGGGCTCGTCTTGACCACAAGTTCGACTTGATGTACGCCAAGCGTGCATTCGTTCACT
GGTATGTGGGTGAAGGAATGGAAGAAGGAGAATTCTCCGAAGCTCGCGAGGATCTCGCTG
CTCTCGAGAAAGATTATGAAGAAGTTGGAGTTGATTCAGTGGAGGGTGAAGCTGAAGAAG
CTGAGGATGAATATTAGTTTGATTGGGATTGAATTGAAACAAAAATAAAGAAACAAATTT
GTGTTGAAATATTTCGTGGTTGACAAGATAATATTTATGAAGATTCGTACAGGATGAGAG
TTAGTGATAAAATATCGACTTATTTACTTTGTTAGAAATCGCGGTCGTTGCTTGAGGTGC
GTTGTAGTTTACCTGATTCGATTCCGTGGATAAGGATTAAGTCAAAAGAATGCTGACAGT
TCAGTCGATGGTATATAAGTTGAACCGCTTATCTACAATATAATATAGGTCTACGTTAAC
ACGTGCTATAATTATGTTTTTTTAATGAAAGCCAAAATA
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[11-278] 2.9E-133 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[11-254] 2.88E-102 |
| PANTHER |
Tubulin (IPR000217) - T[12-457] 0.0 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[13-223] 8.1E-69 |
| PRINTS |
Tubulin (IPR000217) - T[20-40] 3.5E-91 - T[63-82] 3.5E-91 - T[105-116] 3.5E-91 - T[118-142] 3.5E-91 - T[144-162] 3.5E-91 - T[163-184] 3.5E-91 - T[188-201] 3.5E-91 - T[202-222] 3.5E-91 - T[390-418] 3.5E-91 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[28-43] 6.8E-121 - T[55-68] 6.8E-121 - T[98-111] 6.8E-121 - T[130-138] 6.8E-121 - T[158-170] 6.8E-121 - T[171-182] 6.8E-121 - T[224-236] 6.8E-121 - T[284-299] 6.8E-121 - T[331-352] 6.8E-121 - T[357-370] 6.8E-121 - T[370-389] 6.8E-121 - T[395-411] 6.8E-121 - T[432-448] 6.8E-121 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[59-256] 3.0E-84 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[152-158] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[256-447] 2.41E-87 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[258-403] 1.2E-60 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[273-401] 1.5E-51 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[279-393] 7.2E-68 |
| Gene3D |
Tubulin_C (IPR023123) - T[394-460] 2.1E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA1A_HUMAN | 97.118 % | 927 | 0 |
| TBA3C_HUMAN | 98.664 % | 929 | 0 |
| TBA3D_HUMAN | 98.664 % | 929 | 0 |