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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S5...'
  2. Transcript 'KH2012:KH.C1.1279.v1...'
  3. Transcript 'KH2012:KH.C1.3.v1.A....'
  4. Transcript 'KH2012:KH.C4.531.v2....'
  5. Transcript 'KH2012:KH.L119.8.v1....'

Transcript Model

Transcript Id

KH2012:KH.L119.8.v1.A.SL2-1

Possible name(s)

SNX11; SNX12; SNX3

Location

KhL119 [79,071 / 81,972]

Sequences

Amino acid sequence

Length: 418

>KH.L119.8.v1.A.SL2-1
KKPPSLPFPGIIGTFRKRYLEERQQILTDFLQKVVRQTVFLSNTALHLFLQTRLGKKEMD
AMLKDARRRGCMDCIRKAVSLYGAVRPYVSDTQPPEIISESLSTCSVGSCQEYSDSDEFN
SSFCSTNNDRVIGHNNNTKLDENDWVIVCTTPSEEDLQNKHLIESTAYTNVTWLSPRGID
NLGGRKELVLTRRIQSDQIDISSRNYSGVDITQSNSLGTLTNCQSRLDAFRRSSSENALH
NKLNRHSARRSRANNPKVVNTGNPTDCSSSPPQENATKDNSLYSTPEETFQHCRTSNTNL
VGNNLTEVQIHYSSDDKNQNADPVHNLDPISEPVKNDQPDSAQSEVKAFINKESKAAERQ
ISSKVFRSFSAPKQHRQSTYFPRTSSLDSCLGNRSQCIKVTEPKLFGTDGRYKHQILV

Nucleotide sequence

Length: 1,741

>KH2012:KH.L119.8.v1.A.SL2-1
ATCTTGCTAGGAAACAATTAATTAGGTTTTGCAGCAATGATTAACATAATGGACAAGCAT
CATGATAATATATCTCCTGATGAACAAAAGGAGTACATCCATGTTCAAGTATCCAACCCC
ACCATTCACAACACGCACGACGAAGGCAGATTCACCACTTACCAAGTTACACTAAAAAAA
ACCACCAAGTTTGCCATTTCCTGGAATCATCGGAACGTTTAGAAAGCGTTATCTCGAAGA
AAGGCAACAAATTCTAACCGATTTTTTACAGAAGGTTGTGCGACAAACAGTGTTTCTTTC
TAACACTGCCCTCCACTTGTTTCTGCAAACACGACTGGGGAAAAAGGAAATGGATGCGAT
GCTTAAAGATGCTCGTAGAAGAGGATGCATGGACTGCATCAGAAAAGCAGTGTCTTTGTA
CGGAGCCGTTCGCCCTTATGTTTCGGACACGCAACCTCCTGAAATTATTTCAGAATCTCT
TTCCACTTGTTCAGTAGGAAGTTGTCAAGAATATTCGGACAGCGATGAGTTTAACTCAAG
TTTCTGCAGCACTAACAACGACCGGGTAATCGGTCACAATAATAATACTAAGTTAGACGA
AAATGACTGGGTAATCGTCTGTACAACACCATCCGAGGAAGATCTGCAAAACAAACATTT
GATTGAGTCTACAGCATACACAAACGTTACTTGGTTGTCCCCACGCGGCATCGATAACTT
GGGAGGAAGGAAAGAACTTGTCCTAACACGTCGGATTCAATCTGATCAAATTGACATTTC
GTCAAGGAACTATAGTGGTGTCGACATAACTCAGTCCAACAGCTTAGGAACGTTGACCAA
CTGTCAAAGTAGACTAGACGCTTTTCGGAGGTCGTCATCCGAAAACGCACTGCATAATAA
ACTCAACCGGCATTCTGCCCGCAGATCAAGAGCAAACAATCCAAAAGTGGTTAACACTGG
TAACCCGACAGATTGTTCATCATCCCCGCCTCAAGAAAACGCCACCAAAGACAACAGTTT
ATATTCCACTCCAGAAGAAACTTTCCAACATTGCCGAACATCGAACACAAACTTGGTGGG
AAACAATTTAACCGAAGTCCAAATTCATTATTCAAGTGATGATAAAAATCAAAATGCTGA
TCCTGTACATAACTTGGATCCAATCAGCGAACCTGTAAAGAACGACCAGCCTGATTCAGC
CCAGTCTGAGGTTAAAGCATTCATAAATAAAGAATCAAAAGCCGCGGAAAGGCAAATCAG
TTCGAAAGTTTTTCGAAGTTTCTCCGCACCAAAGCAACACAGACAATCCACGTATTTTCC
TCGTACCAGTTCTCTGGATTCGTGTCTGGGTAACCGCTCACAGTGTATAAAAGTTACCGA
ACCAAAGCTTTTTGGTACAGATGGTCGATATAAACACCAGATTCTCGTTTAGCTGATATC
GATGAATGAATTATCGTTTAATATTCGTTTTGTTGTAATTCTTTTAAGTGATTTATCATT
TAGTCCGCTCTCAATTTTTAATCTTACAACATAGTTTATATATGTCAGCACGTCTTTTTT
ATTTTTTAAAGCAATATTAGTTACAAGATCATCTAATTATTATAATCGGCATATAATAGC
TTTTCGGAGCAGCAGCAATATGCTTCATTGTTAATTTTTAAAATAATCGTTTACATATTG
TTGGGGGATTTACAGTTTTGTTAAATGGTTTGATTTAATAAAACAAACTTTTCAAAAATT
A

InterProScan

Gene3D
PX_dom_sf (IPR036871) - T[1-82] 5.8E-7
SUPERFAMILY
PX_dom_sf (IPR036871) - T[3-52] 2.62E-6
Pfam
Phox (IPR001683) - T[4-52] 5.6E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value