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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S2...' > 
  2. Transcript 'Cisavi.CG.ENS81.R26....' > 
  3. Transcript 'KH2012:KH.C4.249.v1....' > 
  4. Transcript 'Harore.CG.MTP2014.S4...' > 
  5. Transcript 'KH2012:KH.L119.8.v2....'

Transcript Model

Transcript Id

KH2012:KH.L119.8.v2.A.SL1-1

Possible name(s)

SNX11; SNX12; SNX3

Gene model

KH2012:KH.L119.8

Location

KhL119 [79,071 / 81,962]

Sequences

Amino acid sequence

Length: 507

>KH.L119.8.v2.A.SL1-1
LGFAAMINIMDKHHDNISPDEQKEYIHVQVSNPTIHNTHDEGRFTTYQVTLKCLLFQTNS
LSFGLKYSVVDRRYSDFTWLRRALARTCDVKPPSLPFPGIIGTFRKRYLEERQQILTDFL
QKVVRQTVFLSNTALHLFLQTRLGKKEMDAMLKDARRRGCMDCIRKAVSLYGAVRPYVSD
TQPPEIISESLSTCSVGSCQEYSDSDEFNSSFCSTNNDRVIGHNNNTKLDENDWVIVCTT
PSEEDLQNKHLIESTAYTNVTWLSPRGIDNLGGRKELVLTRRIQSDQIDISSRNYSGVDI
TQSNSLGTLTNCQSRLDAFRRSSSENALHNKLNRHSARRSRANNPKVVNTGNPTDCSSSP
PQENATKDNSLYSTPEETFQHCRTSNTNLVGNNLTEVQIHYSSDDKNQNADPVHNLDPIS
EPVKNDQPDSAQSEVKAFINKESKAAERQISSKVFRSFSAPKQHRQSTYFPRTSSLDSCL
GNRSQCIKVTEPKLFGTDGRYKHQILV

Nucleotide sequence

Length: 1,844

>KH2012:KH.L119.8.v2.A.SL1-1
GAAACAATTAATTAGGTTTTGCAGCAATGATTAACATAATGGACAAGCATCATGATAATA
TATCTCCTGATGAACAAAAGGAGTACATCCATGTTCAAGTATCCAACCCCACCATTCACA
ACACGCACGACGAAGGCAGATTCACCACTTACCAAGTTACACTAAAATGTCTCTTGTTTC
AGACAAACAGTTTGTCATTCGGCTTAAAGTATTCAGTTGTTGATCGACGATACTCAGATT
TCACTTGGCTGCGTCGTGCTTTGGCTCGTACATGTGACGTAAAACCACCAAGTTTGCCAT
TTCCTGGAATCATCGGAACGTTTAGAAAGCGTTATCTCGAAGAAAGGCAACAAATTCTAA
CCGATTTTTTACAGAAGGTTGTGCGACAAACAGTGTTTCTTTCTAACACTGCCCTCCACT
TGTTTCTGCAAACACGACTGGGGAAAAAGGAAATGGATGCGATGCTTAAAGATGCTCGTA
GAAGAGGATGCATGGACTGCATCAGAAAAGCAGTGTCTTTGTACGGAGCCGTTCGCCCTT
ATGTTTCGGACACGCAACCTCCTGAAATTATTTCAGAATCTCTTTCCACTTGTTCAGTAG
GAAGTTGTCAAGAATATTCGGACAGCGATGAGTTTAACTCAAGTTTCTGCAGCACTAACA
ACGACCGGGTAATCGGTCACAATAATAATACTAAGTTAGACGAAAATGACTGGGTAATCG
TCTGTACAACACCATCCGAGGAAGATCTGCAAAACAAACATTTGATTGAGTCTACAGCAT
ACACAAACGTTACTTGGTTGTCCCCACGCGGCATCGATAACTTGGGAGGAAGGAAAGAAC
TTGTCCTAACACGTCGGATTCAATCTGATCAAATTGACATTTCGTCAAGGAACTATAGTG
GTGTCGACATAACTCAGTCCAACAGCTTAGGAACGTTGACCAACTGTCAAAGTAGACTAG
ACGCTTTTCGGAGGTCGTCATCCGAAAACGCACTGCATAATAAACTCAACCGGCATTCTG
CCCGCAGATCAAGAGCAAACAATCCAAAAGTGGTTAACACTGGTAACCCGACAGATTGTT
CATCATCCCCGCCTCAAGAAAACGCCACCAAAGACAACAGTTTATATTCCACTCCAGAAG
AAACTTTCCAACATTGCCGAACATCGAACACAAACTTGGTGGGAAACAATTTAACCGAAG
TCCAAATTCATTATTCAAGTGATGATAAAAATCAAAATGCTGATCCTGTACATAACTTGG
ATCCAATCAGCGAACCTGTAAAGAACGACCAGCCTGATTCAGCCCAGTCTGAGGTTAAAG
CATTCATAAATAAAGAATCAAAAGCCGCGGAAAGGCAAATCAGTTCGAAAGTTTTTCGAA
GTTTCTCCGCACCAAAGCAACACAGACAATCCACGTATTTTCCTCGTACCAGTTCTCTGG
ATTCGTGTCTGGGTAACCGCTCACAGTGTATAAAAGTTACCGAACCAAAGCTTTTTGGTA
CAGATGGTCGATATAAACACCAGATTCTCGTTTAGCTGATATCGATGAATGAATTATCGT
TTAATATTCGTTTTGTTGTAATTCTTTTAAGTGATTTATCATTTAGTCCGCTCTCAATTT
TTAATCTTACAACATAGTTTATATATGTCAGCACGTCTTTTTTATTTTTTAAAGCAATAT
TAGTTACAAGATCATCTAATTATTATAATCGGCATATAATAGCTTTTCGGAGCAGCAGCA
ATATGCTTCATTGTTAATTTTTAAAATAATCGTTTACATATTGTTGGGGGATTTACAGTT
TTGTTAAATGGTTTGATTTAATAAAACAAACTTTTCAAAAATTA

InterProScan

Gene3D
PX_dom_sf (IPR036871) - T[17-171] 5.9E-26
SUPERFAMILY
PX_dom_sf (IPR036871) - T[22-141] 3.01E-20
Pfam
Phox (IPR001683) - T[25-141] 1.4E-16
ProSiteProfiles
Phox (IPR001683) - T[25-145] 12.333
SMART
Phox (IPR001683) - T[26-142] 1.9E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNX11_HUMAN 37.313 % 89.7 4.32E-20