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TRANSCRIPT CARD

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  1. Region 'REG00001517' > 
  2. Transcript 'KH2012:KH.L122.1.v3....' > 
  3. Clone 'cien80213' > 
  4. Transcript 'KH2012:KH.L122.1.v3....'

Transcript Model

Transcript Id

KH2012:KH.L122.1.v3.A.SL3-1

Possible name(s)

SRSF12; SRSF2; SRSF8

Gene model

KH2012:KH.L122.1

Location

KhL122 [62,582 / 64,904]

Sequences

Amino acid sequence

Length: 192

>KH.L122.1.v3.A.SL3-1
IIVISLLISQTNVKMSRGGRPPPGLDNMVSLKVDNLTYRTSPETLKRSFEKYGDVGDVYI
PRDRYSRESRGFAFVRFYDKRDAEDAMDCMDGKTMDGRVLRVAMARYGRPTEERRDSGRR
GGGGGGMRRRRRSYSRSRSRSRGRKYSQSVSRSRSRSRDRERRRSPSHERRSPTPSPRRS
RSYSRSPAANGD

Nucleotide sequence

Length: 1,008

>KH2012:KH.L122.1.v3.A.SL3-1
ATTAAATTATCGTCATAAGTCTCCTAATATCGCAAACAAACGTAAAAATGTCGCGAGGTG
GACGACCCCCTCCTGGTTTAGATAACATGGTTTCATTGAAAGTAGATAACTTAACATACA
GAACATCACCGGAGACATTAAAACGATCGTTTGAGAAATACGGAGACGTCGGCGATGTAT
ACATACCACGGGACAGATATTCCCGAGAAAGTCGTGGATTTGCTTTCGTTCGTTTCTACG
ACAAACGAGACGCTGAAGACGCGATGGATTGTATGGATGGAAAGACCATGGATGGGAGAG
TGCTGAGAGTTGCCATGGCACGATATGGTCGTCCTACTGAGGAGAGGAGAGATTCTGGGA
GGAGAGGAGGAGGTGGAGGAGGGATGAGGAGGAGAAGGAGGAGTTATTCACGATCACGCT
CCCGATCACGAGGAAGGAAATATTCACAAAGTGTTTCAAGATCAAGGAGCAGATCCCGTG
ATCGTGAAAGAAGAAGAAGTCCTTCACATGAGAGGCGCAGTCCAACTCCATCTCCTCGTC
GATCAAGATCATATTCAAGATCACCAGCAGCCAATGGAGATTGAAGACTTGTCACCAACT
TTATCGTACCAGCAAATAATTTGCATGGGTAGCAGTGCCGGTAGCAGTGGGAATTATGCA
GTAGCAGACGAAGAATTAAATAGTAGCAGATGCGTGTTGCTGTGCCGAGAATCCGGTTAA
TTTTATGTTTGTTTCTTATAATAGTAAGTAATTTTTTAAACATACCGCAAAACTGTTGTT
AAACATTGTTATTTTTTCTTGCACGGAGAACCTATGCCCTTTCAAACTTGGTGTATTTTT
AAAACGATGGTACTTGGTTATGCTCATTTATTATAGCCAATTAACCACATAATAGACATA
AATATAATAATATGAACCATAACTAATGCTTATCTTTGAATTTGTGAATATTTGATAGAA
TTTATTTAAAGATGTAAGTACAGATTGGGACCTTTATTTACTTACAAC

InterProScan

Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[9-128] 3.1E-25
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[22-136] 5.37E-31
ProSiteProfiles
RRM_dom (IPR000504) - T[29-107] 18.53
SMART
RRM_dom (IPR000504) - T[30-103] 2.4E-23
SMART
RRM_dom_euk (IPR003954) - T[30-103] 4.0E-4
Pfam
RRM_dom (IPR000504) - T[32-101] 2.6E-20

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SRSF2_HUMAN 78.723 % 156 2.14E-48
SRSF8_HUMAN 68.132 % 135 1.79E-39
SRS12_HUMAN 45.361 % 80.5 1.18E-18