- Clone 'cien52855' >
- Transcript 'KH2012:KH.C5.535.v1....' >
- Transcript 'KH2012:KH.L129.7.v1....'
Transcript Model
Transcript Id
KH2012:KH.L129.7.v1.A.nonSL2-1
Possible name(s)
SHMT1; SHMT2
Gene model
Location
KhL129 [4,840 / 9,764]
Amino acid sequence
Length: 450
>KH.L129.7.v1.A.nonSL2-1
RIIRNEKERQRDGLELIASENFTSGAVLEALGSCLNNKYSEGYPGVRYYGGTENIDELER
LCQKRALEVFKLNPEEWGVNVQPYSGSPANFAVLTAIVEPHGRIMGLDLPDGGHLTHGFM
TEKKKISATSIFFESMPYKVNPATGLIDYDQLEQNAKLFKPKVIIAGMSCYSRVIDYERI
RKIADANKALVMADMAHVSGLVATGVIPSPFEHCQIVTSTTHKTLRGPRAGIIFYRRGVK
VPATDGKPAEMYNFEKPINEAVFPGLQGGPHNHAIAGVAVCLLQAKSPMFIEYQKNVVSN
AQTLGKVLMDKGYDVVTGGTDTHLILVNLKSKGTDGNRADKVLEAIGVACNKNTCPGDKA
ALRPSGLRLGSPALTSRGLNGKDFEKVADFIDRGVQLTVEIQNSLEPKATFKDFRVKLYN
DDVIIGKVKALKEEVTMFARTFPIPGLKYT
Nucleotide sequence
Length: 2,038
>KH2012:KH.L129.7.v1.A.nonSL2-1
CAGAATTATCAGAAATGAGAAAGAACGGCAGAGAGATGGACTTGAATTAATAGCGTCGGA
GAATTTTACCAGTGGGGCAGTTTTGGAAGCTTTAGGGTCCTGCTTGAATAATAAATACTC
GGAAGGATATCCAGGCGTAAGATATTATGGAGGAACAGAAAACATTGATGAACTGGAGCG
ACTTTGCCAGAAAAGAGCTTTGGAAGTTTTCAAACTCAACCCTGAAGAATGGGGTGTTAA
TGTACAGCCCTACTCAGGCTCACCAGCAAACTTTGCTGTTTTAACAGCCATTGTTGAGCC
CCACGGTCGTATAATGGGGTTGGACCTCCCCGATGGCGGCCATCTTACTCATGGCTTCAT
GACCGAGAAGAAGAAAATATCAGCGACCTCCATTTTCTTTGAGTCGATGCCATATAAGGT
GAATCCTGCAACAGGACTTATAGATTACGATCAACTGGAACAAAATGCAAAACTTTTCAA
ACCGAAAGTGATTATTGCTGGCATGAGTTGTTACTCGCGTGTCATTGATTATGAGCGAAT
ACGCAAGATAGCTGATGCCAACAAAGCACTTGTGATGGCTGACATGGCTCATGTTAGCGG
TTTAGTAGCAACTGGTGTAATCCCTTCACCATTTGAACATTGCCAGATAGTTACCAGCAC
GACACACAAGACGCTAAGGGGTCCACGCGCTGGTATAATCTTCTACAGGCGTGGTGTCAA
AGTACCCGCCACCGATGGCAAACCTGCGGAGATGTACAACTTTGAAAAGCCGATAAATGA
AGCTGTTTTCCCCGGCTTACAGGGTGGCCCCCATAACCATGCGATTGCTGGTGTGGCCGT
GTGTCTGTTGCAAGCAAAATCCCCCATGTTTATCGAATATCAGAAGAACGTGGTAAGCAA
TGCACAAACATTGGGGAAAGTCCTCATGGACAAAGGATATGATGTGGTGACTGGTGGAAC
AGATACGCATCTTATACTGGTTAACCTTAAAAGCAAGGGTACAGATGGTAACAGGGCAGA
CAAAGTGTTAGAAGCCATTGGTGTTGCTTGCAATAAGAACACTTGCCCAGGTGATAAAGC
AGCATTGCGTCCAAGTGGGTTGAGACTTGGTTCACCAGCTCTCACTTCAAGGGGGTTGAA
TGGGAAAGATTTTGAGAAGGTTGCGGATTTCATTGACAGGGGGGTGCAACTGACTGTGGA
GATTCAAAACAGTCTTGAACCCAAAGCTACATTCAAGGATTTCAGAGTGAAGTTATATAA
CGATGATGTCATAATAGGAAAGGTTAAAGCATTGAAGGAAGAAGTTACAATGTTCGCACG
TACATTTCCAATACCTGGCCTTAAATATACTTAAACACTTGAATGCAATATACTAACAAA
GTGCTTTAGGTGCATTGTAGTGTATGTAGCAGTTAATAATAACAACGGTACCTATTTTAT
GCAACATATTTGTATGGCAGTTTGACTGGATCAAAAATTGTATGGCTTTAATATTACTTT
TTGTAAAATTCGTTTTTAAATTTACCCCCCACAAAAAGTGCTATTACTTAGTTTGTACCT
TAGGCACCAAACTTAATAAATACAGGGGAGCCAGGGAGCTGTTTTCCCCGGCCTACGTAT
ATATTTCTGTGAAACAAATCTAAATTATTGGTTGTAATGTTTACTGATTAATGCAGTGCG
GAAATTATATGGTTGGCCTGCCACCCCAGGTTTGGCACCTATGGTTTATATATTGCGTTA
CTGATACTACCTTTATCTTTCGGATCAAGACAACTCCTGTAATGCTTTTGAAGTAATTTG
TTTCTGCTGCTATGTTAACTCTGTTGTACACCTATGGTTCGTACGTAAAACTAGTTTTCA
AATGTAGGTTATTACAAAACAGTAATATTACGTTACCTGTTTGATCAAGGTATATAAAAC
TCTATTGTTTTTGAAGTAATTTGTTTCTGCTGCTTTAATGCTGTTATAACTTGATGCATT
CCACTGATTTGTGTAATTGCTGACGTTTTGTTGCCTTGAATAAATAAAGGGTTTTAAT
| PIRSF |
Ser_HO-MeTrfase (IPR001085) - T[1-450] 1.2E-169 |
| Gene3D |
PyrdxlP-dep_Trfase_dom1 (IPR015422) - T[2-20] 3.5E-206 - T[296-445] 3.5E-206 |
| SUPERFAMILY |
PyrdxlP-dep_Trfase (IPR015424) - T[2-446] 1.52E-173 |
| CDD |
Ser_HO-MeTrfase (IPR001085) - T[2-414] 0.0 |
| Hamap |
Ser_HO-MeTrfase (IPR001085) - T[2-446] 40.461 |
| Gene3D |
PyrdxlP-dep_Trfase_major (IPR015421) - T[21-295] 3.5E-206 |
| ProSitePatterns |
Ser_HO-MeTrfase_PLP_BS (IPR019798) - T[215-231] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GLYC_HUMAN | 71.588 % | 639 | 0 |
| GLYM_HUMAN | 61.384 % | 583 | 0 |