- Clone 'cign029k12' >
- Transcript 'KH2012:KH.L170.28.v2...' >
- Transcript 'KH2012:KH.C5.556.v1....' >
- Transcript 'KH2012:KH.C12.180.v1...' >
- Transcript 'KH2012:KH.L129.7.v1....'
Transcript Model
Transcript Id
KH2012:KH.L129.7.v1.A.nonSL4-1
Possible name(s)
SHMT1; SHMT2
Gene model
Location
KhL129 [4,840 / 9,904]
Amino acid sequence
Length: 493
>KH.L129.7.v1.A.nonSL4-1
ISAYAVSVSYWFKNMSCGDTKPTETKESAWLEQPLEENDPEIYRIIRNEKERQRDGLELI
ASENFTSGAVLEALGSCLNNKYSEGYPGVRYYGGTENIDELERLCQKRALEVFKLNPEEW
GVNVQPYSGSPANFAVLTAIVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMP
YKVNPATGLIDYDQLEQNAKLFKPKVIIAGMSCYSRVIDYERIRKIADANKALVMADMAH
VSGLVATGVIPSPFEHCQIVTSTTHKTLRGPRAGIIFYRRGVKVPATDGKPAEMYNFEKP
INEAVFPGLQGGPHNHAIAGVAVCLLQAKSPMFIEYQKNVVSNAQTLGKVLMDKGYDVVT
GGTDTHLILVNLKSKGTDGNRADKVLEAIGVACNKNTCPGDKAALRPSGLRLGSPALTSR
GLNGKDFEKVADFIDRGVQLTVEIQNSLEPKATFKDFRVKLYNDDVIIGKVKALKEEVTM
FARTFPIPGLKYT
Nucleotide sequence
Length: 2,178
>KH2012:KH.L129.7.v1.A.nonSL4-1
CTCAGTCGTTAGATATCTGCGTATGCGGTATCTGTGTCGTATTGGTTTAAAAACATGTCT
TGTGGAGATACAAAACCGACCGAAACTAAGGAGTCTGCATGGTTGGAGCAACCGCTTGAA
GAAAATGATCCTGAAATCTACAGAATTATCAGAAATGAGAAAGAACGGCAGAGAGATGGA
CTTGAATTAATAGCGTCGGAGAATTTTACCAGTGGGGCAGTTTTGGAAGCTTTAGGGTCC
TGCTTGAATAATAAATACTCGGAAGGATATCCAGGCGTAAGATATTATGGAGGAACAGAA
AACATTGATGAACTGGAGCGACTTTGCCAGAAAAGAGCTTTGGAAGTTTTCAAACTCAAC
CCTGAAGAATGGGGTGTTAATGTACAGCCCTACTCAGGCTCACCAGCAAACTTTGCTGTT
TTAACAGCCATTGTTGAGCCCCACGGTCGTATAATGGGGTTGGACCTCCCCGATGGCGGC
CATCTTACTCATGGCTTCATGACCGAGAAGAAGAAAATATCAGCGACCTCCATTTTCTTT
GAGTCGATGCCATATAAGGTGAATCCTGCAACAGGACTTATAGATTACGATCAACTGGAA
CAAAATGCAAAACTTTTCAAACCGAAAGTGATTATTGCTGGCATGAGTTGTTACTCGCGT
GTCATTGATTATGAGCGAATACGCAAGATAGCTGATGCCAACAAAGCACTTGTGATGGCT
GACATGGCTCATGTTAGCGGTTTAGTAGCAACTGGTGTAATCCCTTCACCATTTGAACAT
TGCCAGATAGTTACCAGCACGACACACAAGACGCTAAGGGGTCCACGCGCTGGTATAATC
TTCTACAGGCGTGGTGTCAAAGTACCCGCCACCGATGGCAAACCTGCGGAGATGTACAAC
TTTGAAAAGCCGATAAATGAAGCTGTTTTCCCCGGCTTACAGGGTGGCCCCCATAACCAT
GCGATTGCTGGTGTGGCCGTGTGTCTGTTGCAAGCAAAATCCCCCATGTTTATCGAATAT
CAGAAGAACGTGGTAAGCAATGCACAAACATTGGGGAAAGTCCTCATGGACAAAGGATAT
GATGTGGTGACTGGTGGAACAGATACGCATCTTATACTGGTTAACCTTAAAAGCAAGGGT
ACAGATGGTAACAGGGCAGACAAAGTGTTAGAAGCCATTGGTGTTGCTTGCAATAAGAAC
ACTTGCCCAGGTGATAAAGCAGCATTGCGTCCAAGTGGGTTGAGACTTGGTTCACCAGCT
CTCACTTCAAGGGGGTTGAATGGGAAAGATTTTGAGAAGGTTGCGGATTTCATTGACAGG
GGGGTGCAACTGACTGTGGAGATTCAAAACAGTCTTGAACCCAAAGCTACATTCAAGGAT
TTCAGAGTGAAGTTATATAACGATGATGTCATAATAGGAAAGGTTAAAGCATTGAAGGAA
GAAGTTACAATGTTCGCACGTACATTTCCAATACCTGGCCTTAAATATACTTAAACACTT
GAATGCAATATACTAACAAAGTGCTTTAGGTGCATTGTAGTGTATGTAGCAGTTAATAAT
AACAACGGTACCTATTTTATGCAACATATTTGTATGGCAGTTTGACTGGATCAAAAATTG
TATGGCTTTAATATTACTTTTTGTAAAATTCGTTTTTAAATTTACCCCCCACAAAAAGTG
CTATTACTTAGTTTGTACCTTAGGCACCAAACTTAATAAATACAGGGGAGCCAGGGAGCT
GTTTTCCCCGGCCTACGTATATATTTCTGTGAAACAAATCTAAATTATTGGTTGTAATGT
TTACTGATTAATGCAGTGCGGAAATTATATGGTTGGCCTGCCACCCCAGGTTTGGCACCT
ATGGTTTATATATTGCGTTACTGATACTACCTTTATCTTTCGGATCAAGACAACTCCTGT
AATGCTTTTGAAGTAATTTGTTTCTGCTGCTATGTTAACTCTGTTGTACACCTATGGTTC
GTACGTAAAACTAGTTTTCAAATGTAGGTTATTACAAAACAGTAATATTACGTTACCTGT
TTGATCAAGGTATATAAAACTCTATTGTTTTTGAAGTAATTTGTTTCTGCTGCTTTAATG
CTGTTATAACTTGATGCATTCCACTGATTTGTGTAATTGCTGACGTTTTGTTGCCTTGAA
TAAATAAAGGGTTTTAAT
| PIRSF |
Ser_HO-MeTrfase (IPR001085) - T[16-493] 9.3E-174 |
| SUPERFAMILY |
PyrdxlP-dep_Trfase (IPR015424) - T[28-489] 4.4E-178 |
| Hamap |
Ser_HO-MeTrfase (IPR001085) - T[34-489] 42.356 |
| CDD |
Ser_HO-MeTrfase (IPR001085) - T[36-457] 0.0 |
| Gene3D |
PyrdxlP-dep_Trfase_dom1 (IPR015422) - T[39-63] 9.7E-209 - T[339-488] 9.7E-209 |
| Gene3D |
PyrdxlP-dep_Trfase_major (IPR015421) - T[64-338] 9.7E-209 |
| ProSitePatterns |
Ser_HO-MeTrfase_PLP_BS (IPR019798) - T[258-274] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GLYC_HUMAN | 70.933 % | 655 | 0 |
| GLYM_HUMAN | 59.831 % | 596 | 0 |