- Transcript 'KH2012:KH.L129.7.v1....'
Transcript Model
Transcript Id
KH2012:KH.L129.7.v1.R.ND1-1
Possible name(s)
SHMT1; SHMT2
Gene model
Location
KhL129 [4,840 / 9,889]
Amino acid sequence
Length: 492
>KH.L129.7.v1.R.ND1-1
SAYAVSVSYWFKNMSCGDTKPTETKESAWLEQPLEENDPEIYRIIRNEKERQRDGLELIA
SENFTSGAVLEALGSCLNNKYSEGYPGVRYYGGTENIDELERLCQKRALEVFKLNPEEWG
VNVQPYSGSPANFAVLTAIVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPY
KVNPATGLIDYDQLEQNAKLFKPKVIIAGMSCYSRVIDYERIRKIADANKALVMADMAHV
SGLVATGVIPSPFEHCQIVTSTTHKTLRGPRAGIIFYRRGVKVPATDGKPAEMYNFEKPI
NEAVFPGLQGGPHNHAIAGVAVCLLQAKSPMFIEYQKNVVSNAQTLGKVLMDKGYDVVTG
GTDTHLILVNLKSKGTDGNRADKVLEAIGVACNKNTCPGDKAALRPSGLRLGSPALTSRG
LNGKDFEKVADFIDRGVQLTVEIQNSLEPKATFKDFRVKLYNDDVIIGKVKALKEEVTMF
ARTFPIPGLKYT
Nucleotide sequence
Length: 2,163
>KH2012:KH.L129.7.v1.R.ND1-1
TCTGCGTATGCGGTATCTGTGTCGTATTGGTTTAAAAACATGTCTTGTGGAGATACAAAA
CCGACCGAAACTAAGGAGTCTGCATGGTTGGAGCAACCGCTTGAAGAAAATGATCCTGAA
ATCTACAGAATTATCAGAAATGAGAAAGAACGGCAGAGAGATGGACTTGAATTAATAGCG
TCGGAGAATTTTACCAGTGGGGCAGTTTTGGAAGCTTTAGGGTCCTGCTTGAATAATAAA
TACTCGGAAGGATATCCAGGCGTAAGATATTATGGAGGAACAGAAAACATTGATGAACTG
GAGCGACTTTGCCAGAAAAGAGCTTTGGAAGTTTTCAAACTCAACCCTGAAGAATGGGGT
GTTAATGTACAGCCCTACTCAGGCTCACCAGCAAACTTTGCTGTTTTAACAGCCATTGTT
GAGCCCCACGGTCGTATAATGGGGTTGGACCTCCCCGATGGCGGCCATCTTACTCATGGC
TTCATGACCGAGAAGAAGAAAATATCAGCGACCTCCATTTTCTTTGAGTCGATGCCATAT
AAGGTGAATCCTGCAACAGGACTTATAGATTACGATCAACTGGAACAAAATGCAAAACTT
TTCAAACCGAAAGTGATTATTGCTGGCATGAGTTGTTACTCGCGTGTCATTGATTATGAG
CGAATACGCAAGATAGCTGATGCCAACAAAGCACTTGTGATGGCTGACATGGCTCATGTT
AGCGGTTTAGTAGCAACTGGTGTAATCCCTTCACCATTTGAACATTGCCAGATAGTTACC
AGCACGACACACAAGACGCTAAGGGGTCCACGCGCTGGTATAATCTTCTACAGGCGTGGT
GTCAAAGTACCCGCCACCGATGGCAAACCTGCGGAGATGTACAACTTTGAAAAGCCGATA
AATGAAGCTGTTTTCCCCGGCTTACAGGGTGGCCCCCATAACCATGCGATTGCTGGTGTG
GCCGTGTGTCTGTTGCAAGCAAAATCCCCCATGTTTATCGAATATCAGAAGAACGTGGTA
AGCAATGCACAAACATTGGGGAAAGTCCTCATGGACAAAGGATATGATGTGGTGACTGGT
GGAACAGATACGCATCTTATACTGGTTAACCTTAAAAGCAAGGGTACAGATGGTAACAGG
GCAGACAAAGTGTTAGAAGCCATTGGTGTTGCTTGCAATAAGAACACTTGCCCAGGTGAT
AAAGCAGCATTGCGTCCAAGTGGGTTGAGACTTGGTTCACCAGCTCTCACTTCAAGGGGG
TTGAATGGGAAAGATTTTGAGAAGGTTGCGGATTTCATTGACAGGGGGGTGCAACTGACT
GTGGAGATTCAAAACAGTCTTGAACCCAAAGCTACATTCAAGGATTTCAGAGTGAAGTTA
TATAACGATGATGTCATAATAGGAAAGGTTAAAGCATTGAAGGAAGAAGTTACAATGTTC
GCACGTACATTTCCAATACCTGGCCTTAAATATACTTAAACACTTGAATGCAATATACTA
ACAAAGTGCTTTAGGTGCATTGTAGTGTATGTAGCAGTTAATAATAACAACGGTACCTAT
TTTATGCAACATATTTGTATGGCAGTTTGACTGGATCAAAAATTGTATGGCTTTAATATT
ACTTTTTGTAAAATTCGTTTTTAAATTTACCCCCCACAAAAAGTGCTATTACTTAGTTTG
TACCTTAGGCACCAAACTTAATAAATACAGGGGAGCCAGGGAGCTGTTTTCCCCGGCCTA
CGTATATATTTCTGTGAAACAAATCTAAATTATTGGTTGTAATGTTTACTGATTAATGCA
GTGCGGAAATTATATGGTTGGCCTGCCACCCCAGGTTTGGCACCTATGGTTTATATATTG
CGTTACTGATACTACCTTTATCTTTCGGATCAAGACAACTCCTGTAATGCTTTTGAAGTA
ATTTGTTTCTGCTGCTATGTTAACTCTGTTGTACACCTATGGTTCGTACGTAAAACTAGT
TTTCAAATGTAGGTTATTACAAAACAGTAATATTACGTTACCTGTTTGATCAAGGTATAT
AAAACTCTATTGTTTTTGAAGTAATTTGTTTCTGCTGCTTTAATGCTGTTATAACTTGAT
GCATTCCACTGATTTGTGTAATTGCTGACGTTTTGTTGCCTTGAATAAATAAAGGGTTTT
AAT
| PIRSF |
Ser_HO-MeTrfase (IPR001085) - T[16-492] 9.4E-174 |
| SUPERFAMILY |
PyrdxlP-dep_Trfase (IPR015424) - T[27-488] 4.4E-178 |
| Hamap |
Ser_HO-MeTrfase (IPR001085) - T[33-488] 42.356 |
| CDD |
Ser_HO-MeTrfase (IPR001085) - T[35-456] 0.0 |
| Gene3D |
PyrdxlP-dep_Trfase_dom1 (IPR015422) - T[38-62] 9.6E-209 - T[338-487] 9.6E-209 |
| Gene3D |
PyrdxlP-dep_Trfase_major (IPR015421) - T[63-337] 9.6E-209 |
| ProSitePatterns |
Ser_HO-MeTrfase_PLP_BS (IPR019798) - T[257-273] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GLYC_HUMAN | 70.933 % | 655 | 0 |
| GLYM_HUMAN | 59.831 % | 597 | 0 |