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TRANSCRIPT CARD

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  1. Transcript 'Moocul.CG.ELv1_2.S19...'
  2. Transcript 'Phmamm.CG.MTP2014.S4...'
  3. EST 'FF743240.1'
  4. Transcript 'KH2012:KH.L129.7.v1....'

Transcript Model

Transcript Id

KH2012:KH.L129.7.v1.R.ND1-1

Possible name(s)

SHMT1; SHMT2

Location

KhL129 [4,840 / 9,889]

Sequences

Amino acid sequence

Length: 492

>KH.L129.7.v1.R.ND1-1
SAYAVSVSYWFKNMSCGDTKPTETKESAWLEQPLEENDPEIYRIIRNEKERQRDGLELIA
SENFTSGAVLEALGSCLNNKYSEGYPGVRYYGGTENIDELERLCQKRALEVFKLNPEEWG
VNVQPYSGSPANFAVLTAIVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPY
KVNPATGLIDYDQLEQNAKLFKPKVIIAGMSCYSRVIDYERIRKIADANKALVMADMAHV
SGLVATGVIPSPFEHCQIVTSTTHKTLRGPRAGIIFYRRGVKVPATDGKPAEMYNFEKPI
NEAVFPGLQGGPHNHAIAGVAVCLLQAKSPMFIEYQKNVVSNAQTLGKVLMDKGYDVVTG
GTDTHLILVNLKSKGTDGNRADKVLEAIGVACNKNTCPGDKAALRPSGLRLGSPALTSRG
LNGKDFEKVADFIDRGVQLTVEIQNSLEPKATFKDFRVKLYNDDVIIGKVKALKEEVTMF
ARTFPIPGLKYT

Nucleotide sequence

Length: 2,163

>KH2012:KH.L129.7.v1.R.ND1-1
TCTGCGTATGCGGTATCTGTGTCGTATTGGTTTAAAAACATGTCTTGTGGAGATACAAAA
CCGACCGAAACTAAGGAGTCTGCATGGTTGGAGCAACCGCTTGAAGAAAATGATCCTGAA
ATCTACAGAATTATCAGAAATGAGAAAGAACGGCAGAGAGATGGACTTGAATTAATAGCG
TCGGAGAATTTTACCAGTGGGGCAGTTTTGGAAGCTTTAGGGTCCTGCTTGAATAATAAA
TACTCGGAAGGATATCCAGGCGTAAGATATTATGGAGGAACAGAAAACATTGATGAACTG
GAGCGACTTTGCCAGAAAAGAGCTTTGGAAGTTTTCAAACTCAACCCTGAAGAATGGGGT
GTTAATGTACAGCCCTACTCAGGCTCACCAGCAAACTTTGCTGTTTTAACAGCCATTGTT
GAGCCCCACGGTCGTATAATGGGGTTGGACCTCCCCGATGGCGGCCATCTTACTCATGGC
TTCATGACCGAGAAGAAGAAAATATCAGCGACCTCCATTTTCTTTGAGTCGATGCCATAT
AAGGTGAATCCTGCAACAGGACTTATAGATTACGATCAACTGGAACAAAATGCAAAACTT
TTCAAACCGAAAGTGATTATTGCTGGCATGAGTTGTTACTCGCGTGTCATTGATTATGAG
CGAATACGCAAGATAGCTGATGCCAACAAAGCACTTGTGATGGCTGACATGGCTCATGTT
AGCGGTTTAGTAGCAACTGGTGTAATCCCTTCACCATTTGAACATTGCCAGATAGTTACC
AGCACGACACACAAGACGCTAAGGGGTCCACGCGCTGGTATAATCTTCTACAGGCGTGGT
GTCAAAGTACCCGCCACCGATGGCAAACCTGCGGAGATGTACAACTTTGAAAAGCCGATA
AATGAAGCTGTTTTCCCCGGCTTACAGGGTGGCCCCCATAACCATGCGATTGCTGGTGTG
GCCGTGTGTCTGTTGCAAGCAAAATCCCCCATGTTTATCGAATATCAGAAGAACGTGGTA
AGCAATGCACAAACATTGGGGAAAGTCCTCATGGACAAAGGATATGATGTGGTGACTGGT
GGAACAGATACGCATCTTATACTGGTTAACCTTAAAAGCAAGGGTACAGATGGTAACAGG
GCAGACAAAGTGTTAGAAGCCATTGGTGTTGCTTGCAATAAGAACACTTGCCCAGGTGAT
AAAGCAGCATTGCGTCCAAGTGGGTTGAGACTTGGTTCACCAGCTCTCACTTCAAGGGGG
TTGAATGGGAAAGATTTTGAGAAGGTTGCGGATTTCATTGACAGGGGGGTGCAACTGACT
GTGGAGATTCAAAACAGTCTTGAACCCAAAGCTACATTCAAGGATTTCAGAGTGAAGTTA
TATAACGATGATGTCATAATAGGAAAGGTTAAAGCATTGAAGGAAGAAGTTACAATGTTC
GCACGTACATTTCCAATACCTGGCCTTAAATATACTTAAACACTTGAATGCAATATACTA
ACAAAGTGCTTTAGGTGCATTGTAGTGTATGTAGCAGTTAATAATAACAACGGTACCTAT
TTTATGCAACATATTTGTATGGCAGTTTGACTGGATCAAAAATTGTATGGCTTTAATATT
ACTTTTTGTAAAATTCGTTTTTAAATTTACCCCCCACAAAAAGTGCTATTACTTAGTTTG
TACCTTAGGCACCAAACTTAATAAATACAGGGGAGCCAGGGAGCTGTTTTCCCCGGCCTA
CGTATATATTTCTGTGAAACAAATCTAAATTATTGGTTGTAATGTTTACTGATTAATGCA
GTGCGGAAATTATATGGTTGGCCTGCCACCCCAGGTTTGGCACCTATGGTTTATATATTG
CGTTACTGATACTACCTTTATCTTTCGGATCAAGACAACTCCTGTAATGCTTTTGAAGTA
ATTTGTTTCTGCTGCTATGTTAACTCTGTTGTACACCTATGGTTCGTACGTAAAACTAGT
TTTCAAATGTAGGTTATTACAAAACAGTAATATTACGTTACCTGTTTGATCAAGGTATAT
AAAACTCTATTGTTTTTGAAGTAATTTGTTTCTGCTGCTTTAATGCTGTTATAACTTGAT
GCATTCCACTGATTTGTGTAATTGCTGACGTTTTGTTGCCTTGAATAAATAAAGGGTTTT
AAT

InterProScan

PIRSF
Ser_HO-MeTrfase (IPR001085) - T[16-492] 9.4E-174
SUPERFAMILY
PyrdxlP-dep_Trfase (IPR015424) - T[27-488] 4.4E-178
Hamap
Ser_HO-MeTrfase (IPR001085) - T[33-488] 42.356
CDD
Ser_HO-MeTrfase (IPR001085) - T[35-456] 0.0
Gene3D
PyrdxlP-dep_Trfase_dom1 (IPR015422) - T[38-62] 9.6E-209 - T[338-487] 9.6E-209
Gene3D
PyrdxlP-dep_Trfase_major (IPR015421) - T[63-337] 9.6E-209
ProSitePatterns
Ser_HO-MeTrfase_PLP_BS (IPR019798) - T[257-273] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GLYC_HUMAN 70.933 % 655 0
GLYM_HUMAN 59.831 % 597 0